RNA–Protein interactions for RNA: ENST00000548825.6

PRPF40B-209, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRPF40B, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-209ENST00000548825 SERHL2Q9H4I8 314 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 STARD5Q9NSY2 213 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 DKK3Q9UBP4 350 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 PCDHGB6Q9Y5F9 930 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 CSNK1G3Q9Y6M4 447 aa12.91□□□□□ -0.34
PRPF40B-209ENST00000548825 PAPLNO95428 1278 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 TBX6O95947 436 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 RPN2P04844 631 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 CCNYL3P0C7X3 344 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 MMP11P24347 488 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 BCL6P41182 706 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 RGS8P57771 180 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 GPM6BQ13491 265 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 NNATQ16517 81 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 ZNF791Q3KP31 576 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 UBE2UQ5VVX9 321 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 MLIPQ5VWP3 458 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 ENPP7Q6UWV6 458 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 PGBD3Q8N328 593 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 DENND6BQ8NEG7 585 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 OR52E1Q8NGJ3 308 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 OR4C15Q8NGM1 316 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 LCN9Q8WX39 176 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 FCGR1BQ92637 280 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 CD93Q9NPY3 652 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 OSGIN1Q9UJX0 560 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 STON1Q9Y6Q2 735 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 ZC3H12DA2A288 527 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 FAM170BA6NMN3 283 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 CDC123O75794 336 aaPredicted RBP12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 DNAJB5O75953 348 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 RASGRP1O95267 797 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 KRT8P05787 483 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 GKN3PP0CG01 181 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 OSMP13725 252 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 DEFA1P59665 94 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 DEFA3P59666 94 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 CSNK1G2P78368 415 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 SRSF5Q13243 272 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 CST6Q15828 149 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 BCL7AQ4VC05 210 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 PYDC2Q56P42 97 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 KIAA1324Q6UXG2 1013 aaKnown RBP12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 NRSN1Q8IZ57 195 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 ACOT4Q8N9L9 421 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 LRIG1Q96JA1 1093 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 MAPKAP1Q9BPZ7 522 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 SSR3Q9UNL2 185 aa12.9□□□□□ -0.34
PRPF40B-209ENST00000548825 PRAMEF27A3QJZ7 478 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 LRRC72A6NJI9 287 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 CSO75390 466 aaKnown RBP12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 PVRP15151 417 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 CBLP22681 906 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 DDX6P26196 483 aaKnown RBP eCLIP12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 TNFSF8P32971 234 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 CSTF2P33240 577 aaKnown RBP eCLIP12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 GJA4P35212 333 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 ACTR1BP42025 376 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 PRMT2P55345 433 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 ACTR1AP61163 376 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 SSX1Q16384 188 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 KIAA1211LQ6NV74 962 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 TMPRSS11AQ6ZMR5 421 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 NCCRP1Q6ZVX7 275 aaPredicted RBP12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 ZER1Q7Z7L7 766 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 NLRP8Q86W28 1048 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 OR4F15Q8NGB8 312 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 TEX47Q8TBZ9 253 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 SMARCD2Q92925 531 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 DACT3Q96B18 629 aaPredicted RBP12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 CAMK1GQ96NX5 476 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 MKRN2Q9H000 416 aaKnown RBP12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 DPEP2Q9H4A9 486 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 PALMDQ9NP74 551 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 MAPRE3Q9UPY8 281 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 PCDHGB1Q9Y5G3 927 aa12.9□□□□□ -0.35
PRPF40B-209ENST00000548825 C2orf92A0A1B0GVN3 265 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 CHRM4P08173 479 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 TGM1P22735 817 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 CD79BP40259 229 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 SLC15A1P46059 708 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 ATAD3BQ5T9A4 648 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 PGBD2Q6P3X8 592 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 RNF165Q6ZSG1 346 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 PLEKHM3Q6ZWE6 761 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 NRARPQ7Z6K4 114 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 SFTPA2Q8IWL1 248 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 GALNT12Q8IXK2 581 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 ADAMTS15Q8TE58 950 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 PATE1Q8WXA2 126 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 PDXPQ96GD0 296 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 TMEM80Q96HE8 168 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 FCRL1Q96LA6 429 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 QRFPRQ96P65 431 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 FAIM2Q9BWQ8 316 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 NEUROD4Q9HD90 331 aa12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 PHPT1Q9NRX4 125 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 GPR55Q9Y2T6 319 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 ARHGEF17Q96PE2 2063 aaPredicted RBP12.89□□□□□ -0.35
PRPF40B-209ENST00000548825 A0A1W2PPK0 400 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms