RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	SH3BGRL2	Q9UJC5	107 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF780B	Q9Y6R6	833 aa		12.33	□□□□□ -0.44
POLE-222	ENST00000545015	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	12.33	□□□□□ -0.44
POLE-222	ENST00000545015	GNG14	A0A1W2PPG7	69 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	LRRC3C	A6NJW4	275 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	FAM166B	A8MTA8	275 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015		G3V3Y1	287 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	AQP7	O14520	342 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	TP53I11	O14683	189 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	BCKDK	O14874	412 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	T	O15178	435 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ACOX3	O15254	700 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	TRIM13	O60858	407 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	TRIM3	O75382	744 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ANXA4	P09525	319 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	DDC	P20711	480 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	PIGA	P37287	484 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	PSPH	P78330	225 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF763	Q0D2J5	394 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	KIAA0040	Q15053	153 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF630	Q2M218	657 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF628	Q5EBL2	1059 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	EMC4	Q5J8M3	183 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF787	Q6DD87	383 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	C10orf107	Q8IVU9	208 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	CCDC63	Q8NA47	563 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	SPPL2A	Q8TCT8	520 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	GATA5	Q9BWX5	397 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ANGPTL4	Q9BY76	406 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	NXF5	Q9H1B4	397 aa	Known RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	DEFB127	Q9H1M4	99 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	TP63	Q9H3D4	680 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	C12orf65	Q9H3J6	166 aa	Known RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF703	Q9H7S9	590 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	ACKR4	Q9NPB9	350 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	RRAGD	Q9NQL2	400 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	SLC35C2	Q9NQQ7	365 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	PRODH2	Q9UF12	536 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	BOK	Q9UMX3	212 aa	Predicted RBP	12.32	□□□□□ -0.44
POLE-222	ENST00000545015	DTX4	Q9Y2E6	619 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	HRH3	Q9Y5N1	445 aa		12.32	□□□□□ -0.44
POLE-222	ENST00000545015	NOTCH2	Q04721	2471 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	GTF3C1	Q12789	2109 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	PRSS44	E7EML9	344 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	ZNHIT1	O43257	154 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	CDC40	O60508	579 aa	Known RBP eCLIP	12.31	□□□□□ -0.44
POLE-222	ENST00000545015	PLOD3	O60568	738 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	SLITRK5	O94991	958 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	SNX4	O95219	450 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	FGF4	P08620	206 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	IFI6	P09912	130 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	DRD5	P21918	477 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	ABCD3	P28288	659 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	MAGEA5	P43359	124 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	PPIC	P45877	212 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	ALDH9A1	P49189	494 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	EMD	P50402	254 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	RPP38	P78345	283 aa	Known RBP	12.31	□□□□□ -0.44
POLE-222	ENST00000545015	SLC10A1	Q14973	349 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	TRMT12	Q53H54	448 aa	Known RBP	12.31	□□□□□ -0.44
POLE-222	ENST00000545015	SP5	Q6BEB4	398 aa	Predicted RBP	12.31	□□□□□ -0.44
POLE-222	ENST00000545015	TMEM211	Q6ICI0	200 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	FAM71E1	Q6IPT2	247 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	SCIMP	Q6UWF3	145 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	IKBIP	Q70UQ0	350 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	CD163	Q86VB7	1156 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	TICAM1	Q8IUC6	712 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	FAM13C	Q8NE31	585 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	ZNF764	Q96H86	408 aa	Predicted RBP	12.31	□□□□□ -0.44
POLE-222	ENST00000545015	LCOR	Q96JN0	433 aa	Predicted RBP	12.31	□□□□□ -0.44
POLE-222	ENST00000545015	FCRL1	Q96LA6	429 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	BTBD9	Q96Q07	612 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	BRINP2	Q9C0B6	783 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	STMN4	Q9H169	189 aa	Predicted RBP	12.31	□□□□□ -0.44
POLE-222	ENST00000545015	MYNN	Q9NPC7	610 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	CHST11	Q9NPF2	352 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	PCDHGB3	Q9Y5G1	929 aa		12.31	□□□□□ -0.44
POLE-222	ENST00000545015	TLDC2	A0PJX2	215 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	FRG2C	A6NGY1	282 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	MYO1G	B0I1T2	1018 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	AZIN1	O14977	448 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	HNRNPR	O43390	633 aa	Known RBP	12.3	□□□□□ -0.44
POLE-222	ENST00000545015	NPHS1	O60500	1241 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	PPM1B	O75688	479 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	PDE9A	O76083	593 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	CLDN14	O95500	239 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	TPO	P07202	933 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	ABCB1	P08183	1280 aa	Predicted RBP	12.3	□□□□□ -0.44
POLE-222	ENST00000545015	RFPL3S	P0C7P2	107 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	NEFH	P12036	1026 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	PCSK2	P16519	638 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	MPI	P34949	423 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	CASP3	P42574	277 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	FBXW4	P57775	412 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	KCNJ2	P63252	427 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	LTB4R	Q15722	352 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	IMPG1	Q17R60	797 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	GXYLT1	Q4G148	440 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	GLIPR1L2	Q4G1C9	344 aa		12.3	□□□□□ -0.44
POLE-222	ENST00000545015	SPDYA	Q5MJ70	313 aa		12.3	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 76 ms