RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 NPFFR2Q9Y5X5 522 aa14.5□□□□□ -0.09
CCDC78-216ENST00000544996 WDR91A4D1P6 747 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 CDC40O60508 579 aaKnown RBP eCLIP14.49□□□□□ -0.09
CCDC78-216ENST00000544996 HSPA4LO95757 839 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 PCSK2P16519 638 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 GPX3P22352 226 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 NTSP30990 170 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 CA7P43166 264 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 DNASE1L1P49184 302 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 DCAF7P61962 342 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 KCNJ2P63252 427 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 RPP38P78345 283 aaKnown RBP14.49□□□□□ -0.09
CCDC78-216ENST00000544996 MRPS35P82673 323 aaKnown RBP14.49□□□□□ -0.09
CCDC78-216ENST00000544996 RPS6KA2Q15349 733 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 CEBPEQ15744 281 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 NTRK2Q16620 822 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 UGT3A2Q3SY77 523 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 GALNTL6Q49A17 601 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 ZNF628Q5EBL2 1059 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 TNFAIP8L3Q5GJ75 292 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 MTFR2Q6P444 385 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 TMEM64Q6YI46 380 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 FAM9CQ8IZT9 166 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 FBXW8Q8N3Y1 598 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 OR10G3Q8NGC4 313 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 OR52R1Q8NGF1 315 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 OR9A2Q8NGT5 310 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 OR2T11Q8NH01 316 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 ZBTB9Q96C00 473 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 PKNOX2Q96KN3 472 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 CCT7Q99832 543 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 TTTY12Q9BZ98 90 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 IL1RL2Q9HB29 575 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 SH2D2AQ9NP31 389 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 SUCOQ9UBS9 1254 aaKnown RBP14.49□□□□□ -0.09
CCDC78-216ENST00000544996 SH3BGRL2Q9UJC5 107 aa14.49□□□□□ -0.09
CCDC78-216ENST00000544996 A0A0G2JMM0 328 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 A0A1W2PPB8 328 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 A0A1W2PRS3 328 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 PINLYPA6NC86 204 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 KIR3DP1A8MWS1 328 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 MYO1GB0I1T2 1018 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 CCL21O00585 134 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 PIP5K1BO14986 540 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 LSM1O15116 133 aaKnown RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 ACOX3O15254 700 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 SLITRK5O94991 958 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 CBX7O95931 251 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 SERPINE1P05121 402 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 GP1BBP13224 206 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 PIGAP37287 484 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 NCBP2P52298 156 aaKnown RBP eCLIP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 RPL38P63173 70 aaKnown RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 CHI3L2Q15782 390 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 RFTN2Q52LD8 501 aaPredicted RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 TBCELQ5QJ74 424 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 PRAMEF20Q5VT98 475 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 OR6Y1Q8NGX8 325 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 DIO2Q92813 273 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 KAT2AQ92830 837 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 HSPBAP1Q96EW2 488 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 LCORQ96JN0 433 aaPredicted RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 PPP3R2Q96LZ3 170 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 SECISBP2Q96T21 854 aaKnown RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 ITPAQ9BY32 194 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 NXF5Q9H1B4 397 aaKnown RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 BOKQ9UMX3 212 aaPredicted RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 ZNF835Q9Y2P0 537 aa14.48□□□□□ -0.09
CCDC78-216ENST00000544996 CHCHD2Q9Y6H1 151 aaPredicted RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 ASH1LQ9NR48 2969 aaKnown RBP14.48□□□□□ -0.09
CCDC78-216ENST00000544996 ANKRD33BA6NCL7 494 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 FAM166BA8MTA8 275 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 TMEM114B3SHH9 223 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 PRRG2O14669 202 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 PLOD3O60568 738 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 GLSO94925 669 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 SNUPNO95149 360 aaKnown RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 JUNP05412 331 aaKnown RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 RNF224P0DH78 156 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 ESRRAP11474 423 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 NAGAP17050 411 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 DDX5P17844 614 aaKnown RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 DRD5P21918 477 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 GRK2P25098 689 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 TACR1P25103 407 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 ABCD3P28288 659 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 MAPK1P28482 360 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 PPICP45877 212 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 ASMTP46597 345 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 EMDP50402 254 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 FBXW4P57775 412 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 HSF1Q00613 529 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 ATP6AP1LQ52LC2 224 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 CMPK2Q5EBM0 449 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 BEND6Q5SZJ8 279 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 ARHGAP11AQ6P4F7 1023 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 Q6ZPB1 254 aaPredicted RBP14.47□□□□□ -0.09
CCDC78-216ENST00000544996 SIMC1Q8NDZ2 872 aa14.47□□□□□ -0.09
CCDC78-216ENST00000544996 OR52N2Q8NGI0 321 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms