RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 MRPL43Q8N983 215 aaKnown RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 OR51L1Q8NGJ5 315 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 DIO2Q92813 273 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 HDHD5Q9BXW7 423 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 BRF2Q9HAW0 419 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 SDR39U1Q9NRG7 319 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 PAK1IP1Q9NWT1 392 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 GSKIPQ9P0R6 139 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 USP3Q9Y6I4 520 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 APBB3O95704 486 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 HOXD8P13378 290 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 PGCP20142 388 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 CCR7P32248 378 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 ZNF140P52738 457 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 ATXN7L3Q14CW9 347 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 RAB41Q5JT25 222 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 CBARPQ8N350 705 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 OR13J1Q8NGT2 312 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 KANTRA0A1W2PQU2 76 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 DLGAP1O14490 977 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 FRS3O43559 492 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 PPM1BO75688 479 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 S100A1P23297 94 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 GALNT1Q10472 559 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 ZNF829Q3KNS6 432 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 HTR3DQ70Z44 454 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 LARP4Q71RC2 724 aaKnown RBP eCLIP12.17□□□□□ -0.461e-7■■■□□ 15.8
CHD4-211ENST00000544484 DTWD1Q8N5C7 304 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 MINDY2Q8NBR6 621 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 NLGN4YQ8NFZ3 816 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 OR9Q2Q8NGE9 314 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 MYRFLQ96LU7 910 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 SOCS7O14512 581 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 ZNF888P0CJ79 500 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 TIMP2P16035 220 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 ITIH1P19827 911 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 HLA-FP30511 346 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 OTX2P32243 289 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 PLP2Q04941 152 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 ZNF565Q8N9K5 539 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 OR9A2Q8NGT5 310 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 ARHGAP9Q9BRR9 750 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 SUSD2Q9UGT4 822 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 HCFC2Q9Y5Z7 792 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 TRBV2A0A0J9YWF9 115 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 GXYLT2A0PJZ3 443 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 SLITRK5O94991 958 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 DHRS4L1P0CG22 281 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 ITGB7P26010 798 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 GRK5P34947 590 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 MC3RP41968 323 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 PIN1Q13526 163 aaPredicted RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 CST9Q5W186 159 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 C15orf40Q8WUR7 153 aa12.17□□□□□ -0.46
CHD4-211ENST00000544484 MOV10Q9HCE1 1003 aaKnown RBP12.17□□□□□ -0.46
CHD4-211ENST00000544484 TSPAN9O75954 239 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 RORAP35398 523 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 TM4SF4P48230 202 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 PHC1P78364 1004 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 MAP4K2Q12851 820 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 LRP8Q14114 963 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 PLBD1Q6P4A8 553 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 SHISA6Q6ZSJ9 500 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 FAM217AQ8IXS0 508 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 CHCHD4Q8N4Q1 142 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 LGALS12Q96DT0 336 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 ZIC5Q96T25 663 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 TREX1Q9NSU2 369 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 EPHA6Q9UF33 1036 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 LSM1O15116 133 aaKnown RBP12.16□□□□□ -0.46
CHD4-211ENST00000544484 SDC1P18827 310 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 CNR2P34972 360 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 RBM34P42696 430 aaKnown RBP12.16□□□□□ -0.46
CHD4-211ENST00000544484 FCRLBQ6BAA4 426 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 TMPRSS12Q86WS5 348 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 MARVELD2Q8N4S9 558 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 OR5D16Q8NGK9 328 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 ARRDC2Q8TBH0 407 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 NUDT15Q9NV35 164 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 HIDE1A8MVS5 230 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 WASH4PA8MWX3 477 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 KIAA0513O60268 411 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 GPR37L1O60883 481 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 C6orf132Q5T0Z8 1188 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 MEX3DQ86XN8 651 aaKnown RBP12.16□□□□□ -0.46
CHD4-211ENST00000544484 C3orf30Q96M34 536 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 CPEB1Q9BZB8 566 aaKnown RBP12.16□□□□□ -0.46
CHD4-211ENST00000544484 VAPAQ9P0L0 249 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 EIF3FO00303 357 aaPredicted RBP12.16□□□□□ -0.46
CHD4-211ENST00000544484 SLC1A7O00341 560 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 ZNF217O75362 1048 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 VNN2O95498 520 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 MAOBP27338 520 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 RPA4Q13156 261 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 CTC1Q2NKJ3 1217 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 GLT8D1Q68CQ7 371 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 PRR22Q8IZ63 422 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 POGLUT1Q8NBL1 392 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 PROKR1Q8TCW9 393 aa12.16□□□□□ -0.46
CHD4-211ENST00000544484 UHRF1Q96T88 793 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms