RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 CSO75390 466 aaKnown RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 TRIM16O95361 564 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 IFNB1P01574 187 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 RPLP0P05388 317 aaKnown RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 IGKV5-2P06315 115 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 CT45A8P0DMV1 189 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 CT45A9P0DMV2 189 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 DESP17661 470 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 CCR4P51679 360 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 LIMK2P53671 638 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 MFGE8Q08431 387 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 SPP2Q13103 211 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 EXOSC7Q15024 291 aaKnown RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 FAM189A2Q15884 450 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 CT45A2Q5DJT8 189 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 ADAMTSL4-AS1Q5T5F5 129 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 ARHGAP17Q68EM7 881 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 RAET1GQ6H3X3 334 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 C18orf65Q6ZTR6 163 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 DDHD1Q8NEL9 900 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 CNRIP1Q96F85 164 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 RPGRIP1Q96KN7 1286 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 F2RL3Q96RI0 385 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 WWP1Q9H0M0 922 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 TMEM181Q9P2C4 612 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 DIMT1Q9UNQ2 313 aaKnown RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 MRPS2Q9Y399 296 aaKnown RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 CSNK1G3Q9Y6M4 447 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 UBE4BO95155 1302 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 SH3TC1Q8TE82 1336 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 BRCA2P51587 3418 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 C15orf61A6NNL5 157 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 FAM72CH0Y354 149 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 AKR7A3O95154 331 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 OR6A2O95222 327 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 GUCA1CO95843 209 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 GNSP15586 552 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 FCARP24071 287 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 TRADDQ15628 312 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 DCAF12Q5T6F0 453 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 FAM72AQ5TYM5 149 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 C12orf60Q5U649 245 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 LIPKQ5VXJ0 399 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 LIPJQ5W064 366 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 RTL6Q6ICC9 239 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 FAM72DQ6L9T8 149 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 IRGCQ6NXR0 463 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 NOTCH2NLQ7Z3S9 236 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 PPP1R42Q7Z4L9 355 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 FAM72BQ86X60 149 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 PARP8Q8N3A8 854 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 OR4D10Q8NGI6 311 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 LIPHQ8WWY8 451 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 GMPPAQ96IJ6 420 aaPredicted RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 LRR1Q96L50 414 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 KCNK16Q96T55 309 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 RAB17Q9H0T7 212 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 PLCXD1Q9NUJ7 323 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 MED17Q9NVC6 651 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 IL20RAQ9UHF4 553 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 TRMT112Q9UI30 125 aaKnown RBP3.18□□□□□ -1.9
SCFD1-207ENST00000544052 ZNF580Q9UK33 172 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 TCF19Q9Y242 345 aa3.18□□□□□ -1.9
SCFD1-207ENST00000544052 HTTP42858 3142 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 SSC5DA1L4H1 1573 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 RBBP6Q7Z6E9 1792 aaKnown RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 MEIOCA2RUB1 952 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 NKX6-3A6NJ46 265 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 GRID2O43424 1007 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 SYNGR4O95473 234 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 ANGPTL1O95841 491 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 PTMAP06454 111 aaKnown RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 HOXB7P09629 217 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 MMP12P39900 470 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 TKTL1P51854 596 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 HSD17B7P56937 341 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 BTG3Q14201 252 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 MEF2DQ14814 521 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 DEFB115Q30KQ5 88 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 MPPE1Q53F39 396 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 CDC42EP5Q6NZY7 148 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 UNC5DQ6UXZ4 953 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 USP50Q70EL3 339 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 TEX9Q8N6V9 391 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 OR5T2Q8NGG2 359 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 C8orf46Q8TAG6 207 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 MRGPRDQ8TDS7 321 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 CAPNS2Q96L46 248 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 C16orf45Q96MC5 204 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 ZNF300Q96RE9 604 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 DGCR6LQ9BY27 220 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 HOXD1Q9GZZ0 328 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 WDR13Q9H1Z4 485 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 RWDD1Q9H446 243 aaPredicted RBP3.17□□□□□ -1.9
SCFD1-207ENST00000544052 GDF3Q9NR23 364 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 HOMER3Q9NSC5 361 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 ATAD3AQ9NVI7 634 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 CACNG5Q9UF02 275 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 AURKCQ9UQB9 309 aa3.17□□□□□ -1.9
SCFD1-207ENST00000544052 LRP12Q9Y561 859 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms