RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 TMEM63AO94886 807 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 COMTP21964 271 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 CD6P30203 668 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 AKR1C3P42330 323 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NOVA1P51513 510 aaKnown RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 AGFG1P52594 562 aaKnown RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF234Q14588 700 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 NR6A1Q15406 480 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 EXT1Q16394 746 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF782Q6ZMW2 699 aaPredicted RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 MOGAT3Q86VF5 341 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 RDH10Q8IZV5 341 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 CENPLQ8N0S6 344 aaPredicted RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 OR52N2Q8NGI0 321 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 OR2L2Q8NH16 312 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 MR1Q95460 341 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 COL21A1Q96P44 957 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 SPATA5L1Q9BVQ7 753 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 RIOX1Q9H6W3 641 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 CHST7Q9NS84 486 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 ACSS1Q9NUB1 689 aaPredicted RBP8.46□□□□□ -1.06
VPS13D-212ENST00000543766 TFCP2L1Q9NZI6 479 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 SLC7A11Q9UPY5 501 aa8.46□□□□□ -1.06
VPS13D-212ENST00000543766 TNRC6CQ9HCJ0 1690 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 NPIPA5A0A0B4J1W7 369 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 C20orf202A1L168 122 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SMIM22K7EJ46 135 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ARPC1BO15143 372 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 UBDO15205 165 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CA11O75493 328 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CD5P06127 495 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 JUNBP17275 347 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 GZMHP20718 246 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 IMPDH1P20839 514 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 DRD5P21918 477 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 HMGB2P26583 209 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 S100GP29377 79 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF41P51814 821 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 JAG1P78504 1218 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 IFITM3Q01628 133 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 TLE4Q04727 773 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 GRM4Q14833 912 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 P2RY14Q15391 338 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 FBXO47Q5MNV8 452 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 LRRN1Q6UXK5 716 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CXXC5Q7LFL8 322 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ADGRG3Q86Y34 549 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SIAH1Q8IUQ4 282 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 HLA-CQ95604 372 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ELMOD3Q96FG2 381 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 PPP3R2Q96LZ3 170 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ZSWIM3Q96MP5 696 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 MMP19Q99542 508 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 RIOK2Q9BVS4 552 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 RAB34Q9BZG1 259 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 TCAF1Q9Y4C2 921 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CD8B2A6NJW9 211 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SIVA1O15304 175 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 FFAR2O15552 330 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ST8SIA3O43173 380 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 APRTP07741 180 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ACO1P21399 889 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 KLF1Q13351 362 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SLBPQ14493 270 aaKnown RBP eCLIP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 GAB4Q2WGN9 574 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SH3PXD2AQ5TCZ1 1133 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF280BQ86YH2 543 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CCDC60Q8IWA6 550 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 LILRA2Q8N149 483 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SIRT6Q8N6T7 355 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 ZNF283Q8N7M2 679 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 NLGN2Q8NFZ4 835 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 OR2D3Q8NGH3 330 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 UBTD2Q8WUN7 234 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 HGDQ93099 445 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 APOLD1Q96LR9 279 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 P2RY13Q9BPV8 354 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 MXRA8Q9BRK3 442 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 COL25A1Q9BXS0 654 aaPredicted RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CSTL1Q9H114 145 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 RGCCQ9H4X1 137 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 NT5DC2Q9H857 520 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 WDR41Q9HAD4 459 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 NAGKQ9UJ70 344 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SHOC2Q9UQ13 582 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 KPTNQ9Y664 436 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CITO14578 2027 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 UBE4BO95155 1302 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 PRSS51A0A1B0GVH4 220 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 KRBOX1C9JBD0 128 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 PIP5K1BO14986 540 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 SIGLEC5O15389 551 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CYB5BO43169 146 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 B4GALT2O60909 372 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 UGT2B11O75310 529 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 JCHAINP01591 159 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 CD2P06729 351 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 PNLIPP16233 465 aa8.45□□□□□ -1.06
VPS13D-212ENST00000543766 RPL10P27635 214 aaKnown RBP8.45□□□□□ -1.06
VPS13D-212ENST00000543766 IL12BP29460 328 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms