RNA–Protein interactions for RNA: ENST00000543545.5

CPSF7-221, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 5

Gene CPSF7, Length 495 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-221	ENST00000543545	EQTN	Q9NQ60	294 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	C19orf53	Q9UNZ5	99 aa	Predicted RBP	9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	CFL2	Q9Y281	166 aa		9.45	□□□□□ -0.9
CPSF7-221	ENST00000543545	RNF103-CHMP3	A0A140T963	221 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	C2orf92	A0A1B0GVN3	265 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR6C76	A6NM76	312 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	UPK1A	O00322	258 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	MRAS	O14807	208 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	AIM2	O14862	343 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	NME6	O75414	186 aa	Predicted RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	DNAJB5	O75953	348 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	KCNH1	O95259	989 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	CBX7	O95931	251 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	IGKV3-11	P04433	115 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	S1PR1	P21453	382 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	CDKN2C	P42773	168 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	TRPC1	P48995	793 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	GPR143	P51810	404 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC37A1	P57057	533 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	RNF4	P78317	190 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545		Q0VFX4	171 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZNHIT3	Q15649	155 aa	Predicted RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	PAGE3	Q5JUK9	113 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	FCRLB	Q6BAA4	426 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	JMJD6	Q6NYC1	403 aa	Predicted RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	BORA	Q6PGQ7	559 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	C6orf120	Q7Z4R8	191 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	TREML1	Q86YW5	311 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	CLEC4F	Q8N1N0	589 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR2L13	Q8N349	312 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC5A8	Q8N695	610 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	SIRT6	Q8N6T7	355 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	PCYOX1L	Q8NBM8	494 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	APCDD1L	Q8NCL9	501 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	SIMC1	Q8NDZ2	872 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	OR56A1	Q8NGH5	318 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	BRIX1	Q8TDN6	353 aa	Known RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	ELP5	Q8TE02	316 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	JADE3	Q92613	823 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	GTF2H4	Q92759	462 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	MOAP1	Q96BY2	351 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	FAM120B	Q96EK7	910 aa	Known RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	NPAS2	Q99743	824 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC35A5	Q9BS91	424 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	YIPF4	Q9BSR8	244 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	LHPP	Q9H008	270 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	CDCP1	Q9H5V8	836 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	LIN28A	Q9H9Z2	209 aa	Known RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	SIRT3	Q9NTG7	399 aa	Predicted RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	NIPSNAP3A	Q9UFN0	247 aa	Predicted RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZNF639	Q9UID6	485 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	TEKT2	Q9UIF3	430 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	FAF1	Q9UNN5	650 aa	Predicted RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	PPIE	Q9UNP9	301 aa	Known RBP	9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	KCNMB2	Q9Y691	235 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545	AKAP13	Q12802	2813 aa		9.44	□□□□□ -0.9
CPSF7-221	ENST00000543545		A0A096LPI6	279 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	ASPDH	A6ND91	283 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	BBIP1	A8MTZ0	92 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	WWP2	O00308	870 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	PRKN	O60260	465 aa	Predicted RBP	9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	ERN1	O75460	977 aa	Known RBP	9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	KRT75	O95678	551 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	PRDX6	P30041	224 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	PRIM2	P49643	509 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	ART3	Q13508	389 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	LASP1	Q14847	261 aa	Known RBP	9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	TBR1	Q16650	682 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	ST3GAL2	Q16842	350 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	GTDC1	Q4AE62	458 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	FHL5	Q5TD97	284 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	AGAP7P	Q5VUJ5	663 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	B3GNTL1	Q67FW5	361 aa	Predicted RBP	9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	REP15	Q6BDI9	236 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	TCTN3	Q6NUS6	607 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	TMEM64	Q6YI46	380 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	GPR155	Q7Z3F1	870 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	DHDDS	Q86SQ9	333 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	RPS19BP1	Q86WX3	136 aa	Known RBP	9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	C9orf40	Q8IXQ3	194 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	FITM2	Q8N6M3	262 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	ZNF615	Q8N8J6	731 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	DNAJB8	Q8NHS0	232 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	GOT1L1	Q8NHS2	421 aa	Predicted RBP	9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	C16orf52	Q8NHV5	167 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	PSMA8	Q8TAA3	256 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	FBXO30	Q8TB52	745 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	SFXN5	Q8TD22	340 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC9A6	Q92581	669 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	RCN3	Q96D15	328 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	AGAP4	Q96P64	663 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	MS4A4E	Q96PG1	132 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	ARHGAP9	Q9BRR9	750 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	ITPA	Q9BY32	194 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	SEMA4C	Q9C0C4	833 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	FOLH1B	Q9HBA9	442 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	SLC52A3	Q9NQ40	469 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	SERHL	Q9NQF3	203 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	GID8	Q9NWU2	228 aa		9.43	□□□□□ -0.9
CPSF7-221	ENST00000543545	GPR83	Q9NYM4	423 aa		9.43	□□□□□ -0.9

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms