RNA–Protein interactions for RNA: ENST00000543123.1

RTN3-212, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 712 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-212ENST00000543123 DVL2O14641 736 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 ACOX3O15254 700 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 ERAL1O75616 437 aaKnown RBP12.03□□□□□ -0.48
RTN3-212ENST00000543123 LRATO95237 230 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 PDYNP01213 254 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 ABHD2P08910 425 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 ABCD3P28288 659 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 TRPC1P48995 793 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 CDK9P50750 372 aaKnown RBP12.03□□□□□ -0.48
RTN3-212ENST00000543123 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 DCAF7P61962 342 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 PSPHP78330 225 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 MAP4K2Q12851 820 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 CSTF3Q12996 717 aaKnown RBP12.03□□□□□ -0.48
RTN3-212ENST00000543123 DUSP8Q13202 625 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 RASA2Q15283 850 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 TOMM20Q15388 145 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 LETMD1Q6P1Q0 360 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 LACC1Q8IV20 430 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 ADIPOR1Q96A54 375 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 TMEM41AQ96HV5 264 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 BRINP2Q9C0B6 783 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 METTL7AQ9H8H3 244 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 PRODH2Q9UF12 536 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 BCAP29Q9UHQ4 241 aa12.03□□□□□ -0.48
RTN3-212ENST00000543123 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
RTN3-212ENST00000543123 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
RTN3-212ENST00000543123 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 KIF2AO00139 706 aaPredicted RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 PPM1BO75688 479 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 ESRRBO95718 433 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 HPNP05981 417 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 CT62P0C5K7 136 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 CD1EP15812 388 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 POU3F2P20265 443 aaPredicted RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 GPX3P22352 226 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 ADH7P40394 386 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 ALDH9A1P49189 494 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 RIPPLY3P57055 190 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 CLCQ05315 142 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 PLCXD2Q0VAA5 305 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 GALNT1Q10472 559 aaPredicted RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 SNTA1Q13424 505 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 UBAP2Q5T6F2 1119 aaKnown RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 TMEM81Q6P7N7 255 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 ARSKQ6UWY0 536 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 TMEM64Q6YI46 380 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 TRMT10CQ7L0Y3 403 aaKnown RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 NUP54Q7Z3B4 507 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 SLC22A9Q8IVM8 553 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 GBP7Q8N8V2 638 aaPredicted RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 NOA1Q8NC60 698 aaKnown RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 UCN3Q969E3 161 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 ERP27Q96DN0 273 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 LCORQ96JN0 433 aaPredicted RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 ZNF382Q96SR6 550 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 GIMAP4Q9NUV9 329 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 FOXD3Q9UJU5 478 aaPredicted RBP12.02□□□□□ -0.49
RTN3-212ENST00000543123 CES1P1Q9UKY3 287 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 EDARQ9UNE0 448 aa12.02□□□□□ -0.49
RTN3-212ENST00000543123 A0A1W2PS29 197 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 BCAS2O75934 225 aaPredicted RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 SUPT7LO94864 414 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 EPPINO95925 133 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 IL2RAP01589 272 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 ECHS1P30084 290 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 HMOX2P30519 316 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 TIMP3P35625 211 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 HSD17B3P37058 310 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 FEN1P39748 380 aaKnown RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 CASP3P42574 277 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 ASCL1P50553 236 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 CDH13P55290 713 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 CRYZQ08257 329 aaKnown RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 PRICKLE4Q2TBC4 344 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 SPIN4Q56A73 249 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 NHSL2Q5HYW2 709 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 TIGD3Q6B0B8 471 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 SLC30A6Q6NXT4 461 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 TIFABQ6ZNK6 161 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 GPRIN3Q6ZVF9 776 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 IFT20Q8IY31 132 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 PRR22Q8IZ63 422 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 C1orf52Q8N6N3 182 aaKnown RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 OR1J4Q8NGS1 313 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 UHMK1Q8TAS1 419 aaKnown RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 GNRHR2Q96P88 292 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 TIMP4Q99727 224 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 OSBPL11Q9BXB4 747 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 ITPAQ9BY32 194 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 PRDM14Q9GZV8 571 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 NXF5Q9H1B4 397 aaKnown RBP12.01□□□□□ -0.49
RTN3-212ENST00000543123 UBQLN3Q9H347 655 aa12.01□□□□□ -0.49
RTN3-212ENST00000543123 PFDN4Q9NQP4 134 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms