RNA–Protein interactions for RNA: ENST00000540904.1

SNHG1-215, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-215ENST00000540904 CNTRLQ7Z7A1 2325 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ASPDHA6ND91 283 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 KLRC4-KLRK1H3BQV0 150 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 NME6O75414 186 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-215ENST00000540904 WISP2O76076 250 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 NADKO95544 446 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-215ENST00000540904 CBX7O95931 251 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 EDN3P14138 238 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ZNF24P17028 368 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 GPX3P22352 226 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 MAPK1P28482 360 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 SOX18P35713 384 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 RFC3P40938 356 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 MEOX1P50221 254 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 TDGF1P3P51864 188 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 SLC18A1P54219 525 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 KCNK10P57789 538 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ALDH6A1Q02252 535 aaKnown RBP8.52□□□□□ -1.05
SNHG1-215ENST00000540904 DUSP8Q13202 625 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 CEBPEQ15744 281 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ZNF791Q3KP31 576 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ZNF628Q5EBL2 1059 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 C6orf136Q5SQH8 315 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 TAGAPQ8N103 731 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 LIX1Q8N485 282 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 SLC15A4Q8N697 577 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 GOLGA6L1Q8N7Z2 621 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ZNF441Q8N8Z8 693 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 GOLM1Q8NBJ4 401 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 FAM13CQ8NE31 585 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ZNF675Q8TD23 568 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ADIPOR1Q96A54 375 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 TP53INP1Q96A56 240 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 PPCDCQ96CD2 204 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 SPACA9Q96E40 222 aaPredicted RBP8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ATP6V1G3Q96LB4 118 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 SGCZQ96LD1 299 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 ITPAQ9BY32 194 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 GLIPR2Q9H4G4 154 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 REEP4Q9H6H4 257 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 PNPOQ9NVS9 261 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 TAS2R7Q9NYW3 318 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 SH3BP4Q9P0V3 963 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 SEC14L3Q9UDX4 400 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 PRODH2Q9UF12 536 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 CFL2Q9Y281 166 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 DTX4Q9Y2E6 619 aa8.52□□□□□ -1.05
SNHG1-215ENST00000540904 A0A0G2JMM0 328 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 A0A1W2PPB8 328 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 A0A1W2PRS3 328 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 KIR3DP1A8MWS1 328 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 MYO1GB0I1T2 1018 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 NPIPA5E9PKD4 350 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 PDPK1O15530 556 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 BCAS2O75934 225 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-215ENST00000540904 UNC5CO95185 931 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 P04436 131 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 FBXO45P0C2W1 286 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 CCL3P10147 92 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 HPCAL1P37235 193 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 MC3RP41968 323 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 ASMTP46597 345 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 EMDP50402 254 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 NRG3P56975 720 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 HSPB3Q12988 150 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 TTMPQ5BVD1 217 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 RNFT1Q5M7Z0 435 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 FHL5Q5TD97 284 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 IL23RQ5VWK5 629 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 SLC22A10Q63ZE4 541 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 ATG16L1Q676U5 607 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 TMEM107Q6UX40 140 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 LYPD8Q6UX82 237 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 GFRALQ6UXV0 394 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 FAM47EQ6ZV65 393 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 TRIM42Q8IWZ5 723 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 PRR22Q8IZ63 422 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 KIRREL3Q8IZU9 778 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 OR2M7Q8NG81 312 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 OR7G2Q8NG99 324 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 OR10G3Q8NGC4 313 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 CIDECQ96AQ7 238 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-215ENST00000540904 ERP27Q96DN0 273 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 MAGED4Q96JG8 741 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 AMDHD1Q96NU7 426 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 NUF2Q9BZD4 464 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 NXF5Q9H1B4 397 aaKnown RBP8.51□□□□□ -1.05
SNHG1-215ENST00000540904 MANSC1Q9H8J5 431 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 AKTIPQ9H8T0 292 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 SACM1LQ9NTJ5 587 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 DEPPQ9NTK1 212 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 THAP1Q9NVV9 213 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 MARCOQ9UEW3 520 aaPredicted RBP8.51□□□□□ -1.05
SNHG1-215ENST00000540904 HAO1Q9UJM8 370 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 NPIPA1Q9UND3 350 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 OSGIN2Q9Y236 505 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 NPFFR2Q9Y5X5 522 aa8.51□□□□□ -1.05
SNHG1-215ENST00000540904 PINLYPA6NC86 204 aa8.5□□□□□ -1.05
SNHG1-215ENST00000540904 CAPN14A8MX76 684 aa8.5□□□□□ -1.05
SNHG1-215ENST00000540904 TFECO14948 347 aaPredicted RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms