RNA–Protein interactions for RNA: ENST00000540876.1

CLDN2-202, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN2, Length 2,919 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-202ENST00000540876 TBL1YQ9BQ87 522 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 NFKBIL1Q9UBC1 381 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 EXTL2Q9UBQ6 330 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 AFF4Q9UHB7 1163 aaKnown RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 LHX6Q9UPM6 363 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 CBY1Q9Y3M2 126 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 TNRC18O15417 2968 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 SLC31A2O15432 143 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 HOXB6P17509 224 aaKnown RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 LMO2P25791 158 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 DDX6P26196 483 aaKnown RBP eCLIP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 MATKP42679 507 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 CCR6P51684 374 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 GPR143P51810 404 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 ITGA1P56199 1179 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 RAB5BP61020 215 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 C1DQ13901 141 aaKnown RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 MELKQ14680 651 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 SOWAHAQ2M3V2 549 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 TMEM44Q2T9K0 475 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 RFTN2Q52LD8 501 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 USP30Q70CQ3 517 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 ANKRD46Q86W74 232 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 NKAIN4Q8IVV8 208 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 SPAG16Q8N0X2 631 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 BMPERQ8N8U9 685 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 TRMT10AQ8TBZ6 339 aaKnown RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 SNX33Q8WV41 574 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 WNT2BQ93097 391 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 MOGAT1Q96PD6 335 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 TSGA13Q96PP4 275 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 OR52E6Q96RD3 313 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 ZCCHC2Q9C0B9 1178 aaKnown RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 SLC6A20Q9NP91 592 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 TMEM184CQ9NVA4 438 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 MARK1Q9P0L2 795 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 CACNG4Q9UBN1 327 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 FZD10Q9ULW2 581 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 TRPV2Q9Y5S1 764 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 NUBP2Q9Y5Y2 271 aa9.23□□□□□ -0.93
CLDN2-202ENST00000540876 SPIN1Q9Y657 262 aaPredicted RBP9.23□□□□□ -0.93
CLDN2-202ENST00000540876 PRR23D1E9PI22 279 aaPredicted RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 IFRD1O00458 451 aaPredicted RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ARPC5O15511 151 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 SERPINA3P01011 423 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 HPXP02790 462 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 PRR23D2P0DMB1 279 aaPredicted RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 SPI1P17947 270 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 HLA-DPA1P20036 260 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ITPKAP23677 461 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 LAP3P28838 519 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 BTCP35070 178 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ACTR1BP42025 376 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 HTR6P50406 440 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 CLDN8P56748 225 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 CDC42P60953 191 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 SPCS3P61009 180 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ERV3-1Q14264 604 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 GUCA2BQ16661 112 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 RNF212Q495C1 297 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 SLC39A12Q504Y0 691 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 FBXO47Q5MNV8 452 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ATG9BQ674R7 924 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 RAET1GQ6H3X3 334 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 C3orf33Q6P1S2 294 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 NAA40Q86UY6 237 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 TMEM17Q86X19 198 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 KRTCAP2Q8N6L1 136 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 OR10G2Q8NGC3 310 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 HASPINQ8TF76 798 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 PIH1D2Q8WWB5 315 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 SENP5Q96HI0 755 aaPredicted RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 C7orf50Q9BRJ6 194 aaKnown RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 CACNG6Q9BXT2 260 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ARL6Q9H0F7 186 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 C11orf16Q9NQ32 467 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 CNOT2Q9NZN8 540 aaKnown RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ZNF225Q9UK10 706 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 LSM2Q9Y333 95 aaKnown RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 DENND4AQ7Z401 1863 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 LOC390937A0A1W2PQ73 354 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 TNFRSF11BO00300 401 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 LCMT2O60294 686 aaKnown RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 SEMA7AO75326 666 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 SPDEFO95238 335 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ADH1CP00326 375 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 NUDT7P0C024 238 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 COX5BP10606 129 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 DRD5P21918 477 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 PTBP1P26599 531 aaKnown RBP eCLIP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 TRHRP34981 398 aaPredicted RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 CXCR3P49682 368 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 RPL38P63173 70 aaKnown RBP9.22□□□□□ -0.93
CLDN2-202ENST00000540876 GSG1Q2KHT4 349 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 MPPE1Q53F39 396 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 ZNF687Q8N1G0 1237 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 CHST14Q8NCH0 376 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 PXT1Q8NFP0 134 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 OR4A15Q8NGL6 344 aa9.22□□□□□ -0.93
CLDN2-202ENST00000540876 GPR150Q8NGU9 434 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms