RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 CSF3P09919 207 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RD3LP0DJH9 198 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SDC1P18827 310 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CPN2P22792 545 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PSMA1P25786 263 aaKnown RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 PTX3P26022 381 aaPredicted RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 KCNJ10P78508 379 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 GPR19Q15760 415 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PYDC2Q56P42 97 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CCNJQ5T5M9 372 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 LCN1P1Q5VSP4 162 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 TPGS2Q68CL5 300 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 FRMPD2BQ6IN97 320 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SLC39A5Q6ZMH5 540 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 DGLUCYQ7Z3D6 616 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 AMZ2Q86W34 360 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 LGI4Q8N135 537 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 FBXO15Q8NCQ5 510 aaPredicted RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 SCAMP4Q969E2 229 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 UBE2E3Q969T4 207 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 VOPP1Q96AW1 172 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 DIRAS2Q96HU8 199 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 WACQ9BTA9 647 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 NTMT1Q9BV86 223 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 KCNN2Q9H2S1 579 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SUV39H2Q9H5I1 410 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CLN6Q9NWW5 311 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MALT1Q9UDY8 824 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CYP8B1Q9UNU6 501 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ZNF780BQ9Y6R6 833 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ABCA4P78363 2273 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CUL9Q8IWT3 2517 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MYO18BQ8IUG5 2567 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 IGLV3-10A0A075B6K4 115 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SH3D21A4FU49 640 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 POM121CA8CG34 1229 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ZNF670-ZNF695F2Z2N8 137 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 FGF19O95750 216 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PLATP00750 562 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SCG5P05408 212 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 TSPAN19P0C672 248 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 LINC00271P0C7V0 271 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 GPX2P18283 190 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 KIR2DL3P43628 341 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MAP2K3P46734 347 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ATP12AP54707 1039 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 DEFB103AP81534 67 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PCDH1Q08174 1060 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 C2orf80Q0P641 193 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MRPL28Q13084 256 aaKnown RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 CHIT1Q13231 466 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 VEZF1Q14119 521 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 GALEQ14376 348 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 LARS2Q15031 903 aaKnown RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 TATDN3Q17R31 274 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 IQCCQ4KMZ1 466 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 DGKKQ5KSL6 1271 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RTP2Q5QGT7 225 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SAXO2Q658L1 398 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 NADSYN1Q6IA69 706 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 UXS1Q8NBZ7 420 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 OR52H1Q8NGJ2 320 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ZNF563Q8TA94 476 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SLC22A8Q8TCC7 542 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MTERF3Q96E29 417 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 LINC00052Q96N35 136 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 WDR26Q9H7D7 661 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RC3H2Q9HBD1 1191 aaKnown RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 HHATLQ9HCP6 504 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ABCB9Q9NP78 766 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 B3GNT2Q9NY97 397 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PCOLCE2Q9UKZ9 415 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 STUB1Q9UNE7 303 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SSR3Q9UNL2 185 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PADI2Q9Y2J8 665 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PCDHB1Q9Y5F3 818 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ALG5Q9Y673 324 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 A0A0B4J203 849 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PDPK1O15530 556 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MPZL2O60487 215 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RNGTTO60942 597 aaKnown RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 PPM1BO75688 479 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SLC25A12O75746 678 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CLDN7O95471 211 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CLDN9O95484 217 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PDYNP01213 254 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 HOXD4P09016 255 aaPredicted RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 ZDHHC11BP0C7U3 371 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 RPS3P23396 243 aaKnown RBP eCLIP4.97□□□□□ -1.61
PROM1-220ENST00000540805 TACR1P25103 407 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 SOX3P41225 446 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MAPKAPK2P49137 400 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 CDH12P55289 794 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 MXD1Q05195 221 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 DSG2Q14126 1118 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 GLYR1Q49A26 553 aaPredicted RBP4.97□□□□□ -1.61
PROM1-220ENST00000540805 ZDHHC20Q5W0Z9 365 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 PLAG1Q6DJT9 500 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 ALG1LQ6GMV1 187 aa4.97□□□□□ -1.61
PROM1-220ENST00000540805 FIP1L1Q6UN15 594 aaKnown RBP4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms