RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 PRELID3BQ9Y3B1 194 aa8.26□□□□□ -1.09
DDB1-217ENST00000540166 MKI67P46013 3256 aaKnown RBP8.26□□□□□ -1.09
DDB1-217ENST00000540166 ARHGEF33A8MVX0 844 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 MAGEB17A8MXT2 336 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ZNF670-ZNF695F2Z2N8 137 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 OR1I1O60431 355 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 EPB42P16452 691 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 TRIM23P36406 574 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 TGM4P49221 684 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 VSX2P58304 361 aaPredicted RBP8.25□□□□□ -1.09
DDB1-217ENST00000540166 VLDLRP98155 873 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 BAMBIQ13145 260 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 GBX1Q14549 363 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 NTRK2Q16620 822 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 FBXL22Q6P050 247 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 CD300LGQ6UXG3 332 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 C17orf107Q6ZR85 190 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ADGRG2Q8IZP9 1017 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 OR7D4Q8NG98 312 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 OR4A15Q8NGL6 344 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 UFD1Q92890 307 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ATOH8Q96SQ7 321 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 TEX12Q9BXU0 123 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ADGRE3Q9BY15 652 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 OR51J1Q9H342 316 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 SH3BP4Q9P0V3 963 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 EXTL2Q9UBQ6 330 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 FBXO10Q9UK96 956 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 FKBP7Q9Y680 259 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 TEX13CA0A0J9YWL9 993 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 OR10H3O60404 316 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 HRGP04196 525 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 TPOP07202 933 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 STARP49675 285 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ERVPABLB-1P60509 514 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ZNF77Q15935 545 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ZNF528Q3MIS6 628 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 SHEQ5VZ18 495 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 C3P1Q6ZMU1 363 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ADGRG3Q86Y34 549 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 RBFAQ8N0V3 343 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 CYB5D2Q8WUJ1 264 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 RFT1Q96AA3 541 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 APOLD1Q96LR9 279 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 MAPKAP1Q9BPZ7 522 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 FAM83CQ9BQN1 747 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 NMUR1Q9HB89 426 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 KLHL1Q9NR64 748 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 CRLS1Q9UJA2 301 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 PCDHGB7Q9Y5F8 929 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 A0A1B0GVI7 797 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 SH3D21A4FU49 640 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 TLR4O00206 839 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 PDCD5O14737 125 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 LDB2O43679 373 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 IL1AP01583 271 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 OPN1SWP03999 348 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 HMGN1P05114 100 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 HIST1H2AGP0C0S8 130 aaPredicted RBP8.25□□□□□ -1.09
DDB1-217ENST00000540166 HLA-EP13747 358 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ZNF30P17039 623 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 HIST1H2ADP20671 130 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 AVPR1BP47901 424 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 IL10RBQ08334 325 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 ABRAXAS2Q15018 415 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 DUOXA1Q1HG43 343 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 HKDC1Q2TB90 917 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 IFI44LQ53G44 452 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 IDNKQ5T6J7 187 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 KIAA1211LQ6NV74 962 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 C11orf88Q6PI97 169 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 LIPIQ6XZB0 460 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 C11orf65Q8NCR3 313 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 FAM46DQ8NEK8 389 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 HIST1H2AHQ96KK5 128 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 C12orf66Q96MD2 445 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 HIST1H2AJQ99878 128 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 H2AFJQ9BTM1 129 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 PLCXD1Q9NUJ7 323 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 NUDT4Q9NZJ9 180 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 CLEC4AQ9UMR7 237 aa8.25□□□□□ -1.09
DDB1-217ENST00000540166 A0A1B0GTL3 188 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 POM121CA8CG34 1229 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 GJB3O75712 270 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 GADD45GO95257 159 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 RPS17P08708 135 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 RAB3BP20337 219 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 MAOBP27338 520 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 GDF5P43026 501 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 ZNF169Q14929 603 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 TMEM196Q5HYL7 178 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 RAB41Q5JT25 222 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 OR4F3Q6IEY1 312 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 HAGHLQ6PII5 290 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 Q6ZSR9 355 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 C9orf62Q8N4C0 152 aa8.24□□□□□ -1.09
DDB1-217ENST00000540166 ZNF655Q8N720 491 aaPredicted RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 FUBP1Q96AE4 644 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 PDLIM5Q96HC4 596 aaKnown RBP8.24□□□□□ -1.09
DDB1-217ENST00000540166 ZNF285Q96NJ3 590 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms