RNA–Protein interactions for RNA: ENST00000540037.5

SCNN1A-215, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 1 (best) BASIC

Gene SCNN1A, Length 3,040 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-215ENST00000540037 GLTPD2A6NH11 291 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 SOD1P00441 154 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 HLA-DQB1P01920 261 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 PRKAR2AP13861 404 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ACLYP53396 1101 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 PPP3R1P63098 170 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CSTF1Q05048 431 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 PRKCZQ05513 592 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 FCN2Q15485 313 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF791Q3KP31 576 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CST9Q5W186 159 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 MZT2BQ6NZ67 158 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 C6orf120Q7Z4R8 191 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 MARCH9Q86YJ5 346 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 AP3S1Q92572 193 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ZNF354BQ96LW1 612 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 TREX2Q9BQ50 279 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 QRSL1Q9H0R6 528 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CDH10Q9Y6N8 788 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 A0A0A6YYJ9 748 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC5A10A0PJK1 596 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CIB4A0PJX0 185 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 GSAPA4D1B5 854 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC28A2O43868 658 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 HCN1O60741 890 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 C1orf105O95561 183 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 C1GALT1C1LP0DN25 315 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 KCNJ5P48544 419 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 INPP1P49441 399 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CNTN1Q12860 1018 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ELAVL2Q12926 359 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 MAB21L1Q13394 359 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 TPBGQ13641 420 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CREB3L2Q70SY1 520 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 OR8D4Q8NGM9 314 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 XAGE5Q8WWM1 108 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 SORCS1Q8WY21 1168 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 KIAA1143Q96AT1 154 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 EXOSC8Q96B26 276 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 KCNJ15Q99712 375 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 DHRS9Q9BPW9 319 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 YIPF4Q9BSR8 244 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 SYT17Q9BSW7 474 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 MED18Q9BUE0 208 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 GTPBP2Q9BX10 602 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 RNF32Q9H0A6 362 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 SPEF1Q9Y4P9 236 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 TRAV6A0A075B6T7 132 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 A0A0G2JN53 185 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 PROM1O43490 865 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 EPPINO95925 133 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 MYCP01106 439 aaPredicted RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ELK1P19419 428 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 PKLRP30613 574 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ESCO2Q56NI9 601 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 RNLSQ5VYX0 342 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ANKRD54Q6NXT1 300 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CFAP206Q8IYR0 622 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 OR6T1Q8NGN1 323 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 NEIL3Q8TAT5 605 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ZC3HAV1LQ96H79 300 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 PPIL3Q9H2H8 161 aaKnown RBP13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 SLC28A3Q9HAS3 691 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CNIH4Q9P003 139 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 CLCA2Q9UQC9 943 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 ITM2BQ9Y287 266 aa13.15□□□□□ -0.3
SCNN1A-215ENST00000540037 STK25O00506 426 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 FRS3O43559 492 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 TBX6O95947 436 aaPredicted RBP13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 MTNR1AP48039 350 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF157P51786 506 aaPredicted RBP13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 EFNB1P98172 346 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 MRPL28Q13084 256 aaKnown RBP13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF284Q2VY69 593 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 C3orf38Q5JPI3 329 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 FIBINQ8TAL6 211 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 NEURL3Q96EH8 262 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ART5Q96L15 291 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ARHGAP9Q9BRR9 750 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 HDHD2Q9H0R4 259 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 CDCP1Q9H5V8 836 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 UCKL1Q9NWZ5 548 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 GSTK1Q9Y2Q3 226 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 GABRPO00591 440 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ORC5O43913 435 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ALPPL2P10696 532 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ACP2P11117 423 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 GABRA5P31644 462 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 SRP9P49458 86 aaKnown RBP13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 CDK5Q00535 292 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 TMEM115Q12893 351 aaPredicted RBP13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 GPR176Q14439 515 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 KIAA1161Q6NSJ0 714 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 TRILQ7L0X0 811 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 OR8H3Q8N146 312 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 ZNF366Q8N895 744 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 OR11H4Q8NGC9 324 aa13.14□□□□□ -0.31
SCNN1A-215ENST00000540037 AKAP1Q92667 903 aaKnown RBP eCLIP13.14□□□□□ -0.311e-6■■■■■ 35.7
SCNN1A-215ENST00000540037 KLK6Q92876 244 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms