RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 GSTM4Q03013 218 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 C11orf91Q3C1V1 193 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 RUNDC3AQ59EK9 446 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 METTL2BQ6P1Q9 378 aaKnown RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 OR51A7Q8NH64 312 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF583Q96ND8 569 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ANKHQ9HCJ1 492 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 NEUROD4Q9HD90 331 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 LTB4R2Q9NPC1 389 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 OBP2AQ9NY56 170 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 CD8B2A6NJW9 211 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 CD8BP10966 210 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 SOX3P41225 446 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ACTR1BP42025 376 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 MAP2K3P46734 347 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PRLHRP49683 370 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ACTR1AP61163 376 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 STXBP1P61764 594 aaKnown RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 HYAL2Q12891 473 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 TOMM20Q15388 145 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 SLC27A4Q6P1M0 643 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 TBPL2Q6SJ96 375 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 GALNTL5Q7Z4T8 443 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ELMOD2Q8IZ81 293 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 CHCHD4Q8N4Q1 142 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 UBE2FQ969M7 185 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 MRPL38Q96DV4 380 aaKnown RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ERMAPQ96PL5 475 aaPredicted RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PRSS16Q9NQE7 514 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PPIEQ9UNP9 301 aaKnown RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PTPRSQ13332 1948 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 A0A1W2PQL4 384 aaPredicted RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 IGLON5A6NGN9 336 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PSMD9O00233 223 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 XKRYO14609 159 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PRMT3O60678 531 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ITGA3P26006 1051 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PTGER1P34995 402 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 P2RY2P41231 377 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 GNG2P59768 71 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 TBPL1P62380 186 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 BTN3A2P78410 334 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PIN1Q13526 163 aaPredicted RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 MAD2L1BPQ15013 274 aaPredicted RBP9.48□□□□□ -0.89
TRAF1-202ENST00000540010 TBC1D25Q3MII6 688 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF367Q7RTV3 350 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 C6orf120Q7Z4R8 191 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 FAM86B1Q8N7N1 296 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 LMNTD1Q8N9Z9 388 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 SMPDL3AQ92484 453 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 MCHR1Q99705 422 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 ACPTQ9BZG2 426 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 DPAGT1Q9H3H5 408 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 MAGIXQ9H6Y5 334 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 MBD2Q9UBB5 411 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 PCDHA9Q9Y5H5 950 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 BPTFQ12830 3046 aa9.48□□□□□ -0.89
TRAF1-202ENST00000540010 CCDC85CA6NKD9 419 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 DUXAA6NLW8 204 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 S100A9P06702 114 aaKnown RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 C1GALT1C1LP0DN25 315 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 KCNJ8Q15842 424 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ANKRD54Q6NXT1 300 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PARM1Q6UWI2 310 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 NCSTNQ92542 709 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PMEPA1Q969W9 287 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CNDP2Q96KP4 475 aaKnown RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 GAL3ST4Q96RP7 486 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 MYADMQ96S97 322 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 SRMSQ9H3Y6 488 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CPNE5Q9HCH3 593 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 HEBP1Q9NRV9 189 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 WDR45Q9Y484 360 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 FXYD6-FXYD2A0A087WZ82 144 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 NUDT7P0C024 238 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 TFPIP10646 304 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 HK1P19367 917 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 DCKP27707 260 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CD40LGP29965 261 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 OPRD1P41143 372 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 MAN2A2P49641 1150 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 AP3S2P59780 193 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PUDPQ08623 228 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PIAS4Q8N2W9 510 aaPredicted RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF676Q8N7Q3 588 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 RAB7BQ96AH8 199 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ITPKCQ96DU7 683 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 RNF31Q96EP0 1072 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 COQ10AQ96MF6 247 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 CD180Q99467 661 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 NDC1Q9BTX1 674 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 ZNF717Q9BY31 904 aaPredicted RBP9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PLA2G2FQ9BZM2 168 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 FXYD6Q9H0Q3 95 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 TRIM36Q9NQ86 728 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 C12orf4Q9NQ89 552 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 POU2F3Q9UKI9 436 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 PIKFYVEQ9Y2I7 2098 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 A0A1W2PP55 124 aa9.47□□□□□ -0.89
TRAF1-202ENST00000540010 A0A1W2PRG6 482 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms