RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 ZSCAN32Q9NX65 697 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 SEC14L3Q9UDX4 400 aa13.74□□□□□ -0.21
CDCA3-207ENST00000538862 PCYT1BQ9Y5K3 369 aaPredicted RBP13.74□□□□□ -0.21
CDCA3-207ENST00000538862 PDZK1P1A8MUH7 402 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 TIE1P35590 1138 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 COX10Q12887 443 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 METRNLQ641Q3 311 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 CD300LDQ6UXZ3 194 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 MAML2Q8IZL2 1156 aaPredicted RBP13.73□□□□□ -0.21
CDCA3-207ENST00000538862 CACTIN-AS1Q8N1I8 211 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 PROKR2Q8NFJ6 384 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 RAB7BQ96AH8 199 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 MND1Q9BWT6 205 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 P2RX2Q9UBL9 471 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 SEC14L4Q9UDX3 406 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 TRAPPC4Q9Y296 219 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 PRKAB1Q9Y478 270 aa13.73□□□□□ -0.21
CDCA3-207ENST00000538862 H3BN98 237 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SLC28A2O43868 658 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 CSO75390 466 aaKnown RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 DRD2P14416 443 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 TPTEP56180 551 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 MESP2Q0VG99 397 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 FOXD4Q12950 439 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SPHARQ15513 63 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 NDUFA9Q16795 377 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SLC25A30Q5SVS4 291 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 TSSK4Q6SA08 328 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 DEF8Q6ZN54 512 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 TBC1D19Q8N5T2 526 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 PLA2G15Q8NCC3 412 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 OR4D11Q8NGI4 311 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 EXOSC8Q96B26 276 aaKnown RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 MSANTD3Q96H12 275 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 CEP19Q96LK0 163 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 TREX2Q9BQ50 279 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 MENTQ9BUN1 341 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 DDX31Q9H8H2 851 aaKnown RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 C2orf42Q9NWW7 574 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 EHD3Q9NZN3 535 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 DEC1Q9P2X7 70 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SLC23A2Q9UGH3 650 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 KLHL3Q9UH77 587 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 A0A1W2PPV9 198 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 A0A1W2PRQ8 180 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 ANTXRLA6NF34 631 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 H7BY64 318 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 KMOO15229 486 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 NDUFS4O43181 175 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 TMPRSS11DO60235 418 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SOX14O95416 240 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 NFATC1O95644 943 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 EGFP01133 1207 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 APOA1P02647 267 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 DNTTP04053 509 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 PSMA1P25786 263 aaKnown RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SLC6A11P48066 632 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 TP53BP2Q13625 1128 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 CCINQ13939 588 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 AKAP14Q86UN6 197 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 RBM45Q8IUH3 476 aaKnown RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SLC34A3Q8N130 599 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 CLIP4Q8N3C7 705 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 FAM26EQ8N5C1 309 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 NANOGP1Q8N7R0 232 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SCAIQ8N9R8 606 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 VANGL1Q8TAA9 524 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SLC7A13Q8TCU3 470 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 PRAP1Q96NZ9 151 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 SLC30A2Q9BRI3 323 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 ASPNQ9BXN1 380 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 HDAC8Q9BY41 377 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 CHRDQ9H2X0 955 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 DNAJC27Q9NZQ0 273 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 C5AR2Q9P296 337 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 A4GNTQ9UNA3 340 aa13.72□□□□□ -0.21
CDCA3-207ENST00000538862 MUC22E2RYF6 1773 aaPredicted RBP13.72□□□□□ -0.21
CDCA3-207ENST00000538862 CTDSP2O14595 271 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 LAMTOR5O43504 91 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 UGT2B17O75795 530 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 TP53P04637 393 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 OR12D1P0DN82 309 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 FEN1P39748 380 aaKnown RBP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 OPRD1P41143 372 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 DGKEP52429 567 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 MLLT11Q13015 90 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 TARDBPQ13148 414 aaKnown RBP eCLIP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 DOC2BQ14184 412 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 ZNF234Q14588 700 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 GAB4Q2WGN9 574 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 TMEM196Q5HYL7 178 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 ATAD3BQ5T9A4 648 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 DESI1Q6ICB0 168 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 OR4C11Q6IEV9 310 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 KIAA1211LQ6NV74 962 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 CCBE1Q6UXH8 406 aaPredicted RBP13.71□□□□□ -0.21
CDCA3-207ENST00000538862 GDPD3Q7L5L3 318 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 UBE3DQ7Z6J8 389 aa13.71□□□□□ -0.21
CDCA3-207ENST00000538862 TCEANCQ8N8B7 351 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms