RNA–Protein interactions for RNA: ENST00000538696.5

CLN6-202, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-202ENST00000538696 LCN8Q6JVE9 175 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 ANKRD37Q7Z713 158 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 SPATA24Q86W54 205 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 DHFR2Q86XF0 187 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 PTRH1Q86Y79 214 aaKnown RBP16.09■□□□□ 0.17
CLN6-202ENST00000538696 PNPT1Q8TCS8 783 aaKnown RBP16.09■□□□□ 0.17
CLN6-202ENST00000538696 ADAMTS17Q8TE56 1095 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 PYDC1Q8WXC3 89 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 FAM120BQ96EK7 910 aaKnown RBP16.09■□□□□ 0.17
CLN6-202ENST00000538696 ZNF681Q96N22 645 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 ALOXE3Q9BYJ1 711 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 MUC13Q9H3R2 512 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 CXorf36Q9H7Y0 433 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 TPT1P8Q9HAU6 139 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 TAS2R9Q9NYW1 312 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 PCDHGB4Q9UN71 923 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 SSUH2Q9Y2M2 353 aa16.09■□□□□ 0.17
CLN6-202ENST00000538696 LOC102723996A0A087X1L8 192 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 EVPLLA8MZ36 301 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 SOCS6O14544 535 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 NTSP30990 170 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 FEN1P39748 380 aaKnown RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 STT3AP46977 705 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 CDK9P50750 372 aaKnown RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 XKP51811 444 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 MRPS22P82650 360 aaKnown RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 EEF1A2Q05639 463 aaKnown RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 SERTAD2Q14140 314 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 SSPNQ14714 243 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 CPZQ66K79 652 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 SPACA3Q8IXA5 215 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 OR2T12Q8NG77 320 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 METTL21AQ8WXB1 218 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 ZCCHC14Q8WYQ9 949 aaKnown RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 C8orf44Q96CB5 159 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 ZBED6CLQ96FA7 236 aaPredicted RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 SLC35A5Q9BS91 424 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 GLIPR2Q9H4G4 154 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 DCLRE1BQ9H816 532 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 SIRT3Q9NTG7 399 aaPredicted RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 ACSS1Q9NUB1 689 aaPredicted RBP16.08■□□□□ 0.16
CLN6-202ENST00000538696 ACTR3BQ9P1U1 418 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 BCAP29Q9UHQ4 241 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 PSME2Q9UL46 239 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 ENTPD4Q9Y227 616 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 RAXQ9Y2V3 346 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 GMEB1Q9Y692 573 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 IGF2RP11717 2491 aa16.08■□□□□ 0.16
CLN6-202ENST00000538696 IGHV3-20A0A0C4DH32 117 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 MYO1GB0I1T2 1018 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 H3BNX3 289 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 FKBP6O75344 327 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 STAMBPO95630 424 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 C8BP07358 591 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 PPIBP23284 216 aaKnown RBP16.07■□□□□ 0.16
CLN6-202ENST00000538696 PTGER1P34995 402 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 MANFP55145 182 aaKnown RBP16.07■□□□□ 0.16
CLN6-202ENST00000538696 HSPB3Q12988 150 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 SFT2D3Q587I9 215 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 ATP1A1-AS1Q5TC04 95 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 AAGABQ6PD74 315 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 DGAT2L6Q6ZPD8 337 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 CPEB2Q7Z5Q1 589 aaKnown RBP16.07■□□□□ 0.16
CLN6-202ENST00000538696 MRGPREQ86SM8 312 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 PROSER1Q86XN7 944 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 RAB43Q86YS6 212 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 ZZZ3Q8IYH5 903 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 MICU2Q8IYU8 434 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 OR5AK3PQ8NH89 298 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 SUN3Q8TAQ9 357 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 RSRC1Q96IZ7 334 aaKnown RBP16.07■□□□□ 0.16
CLN6-202ENST00000538696 LRGUKQ96M69 825 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 AMDHD1Q96NU7 426 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 DCBLD2Q96PD2 775 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 BBS4Q96RK4 519 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 CCNL2Q96S94 520 aaPredicted RBP16.07■□□□□ 0.16
CLN6-202ENST00000538696 WDR77Q9BQA1 342 aaPredicted RBP16.07■□□□□ 0.16
CLN6-202ENST00000538696 TRIM15Q9C019 465 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 EPS8L2Q9H6S3 715 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 GIMAP4Q9NUV9 329 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 C19orf25Q9UFG5 118 aaPredicted RBP16.07■□□□□ 0.16
CLN6-202ENST00000538696 ZNF780BQ9Y6R6 833 aa16.07■□□□□ 0.16
CLN6-202ENST00000538696 NUP214P35658 2090 aaPredicted RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 RNF103-CHMP3A0A140T963 221 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 A0A1W2PQ72 361 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 TCRBV3S1A0A5B6 114 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 SYNDIG1LA6NDD5 238 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 A8MUA0 341 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 TAF4O00268 1085 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 PCDH17O14917 1159 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 NKX2-8O15522 239 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 EFSO43281 561 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 SLC35E2P0CK97 266 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 COX6A1P12074 109 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 PORP16435 677 aaPredicted RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 GPX2P18283 190 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 GGT1P19440 569 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 CSNK2A2P19784 350 aaPredicted RBP16.06■□□□□ 0.16
CLN6-202ENST00000538696 UQCRC2P22695 453 aa16.06■□□□□ 0.16
CLN6-202ENST00000538696 NCBP2P52298 156 aaKnown RBP eCLIP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms