RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 LRIT2A6NDA9 550 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 PLD2O14939 933 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 ERAL1O75616 437 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 NFATC1O95644 943 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 LGI1O95970 557 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 EIF2S1P05198 315 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 CHRM5P08912 532 aaPredicted RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 ETV5P41161 510 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 IL12RB1P42701 662 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 ETV1P50549 477 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 OR2B6P58173 313 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 CDK5Q00535 292 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 FUT5Q11128 374 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 LASP1Q14847 261 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 ZNF79Q15937 498 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 BAK1Q16611 211 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 ATAT1Q5SQI0 421 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 RSBN1Q5VWQ0 802 aaPredicted RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 C1orf94Q6P1W5 598 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 MEX3DQ86XN8 651 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 SUSD6Q92537 303 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 TMEM203Q969S6 136 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 C12orf66Q96MD2 445 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 WDFY2Q96P53 400 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 NELL2Q99435 816 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 MACROD1Q9BQ69 325 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 FAIM2Q9BWQ8 316 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 HDAC8Q9BY41 377 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 RERGLQ9H628 205 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 TXNL4BQ9NX01 149 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 CARD8Q9Y2G2 431 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 NUP210Q8TEM1 1887 aaPredicted RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 APOL3O95236 402 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 LARS2Q15031 903 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 SNAPC1Q16533 368 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 ZNF750Q32MQ0 723 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 SLC25A30Q5SVS4 291 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 PIP5KL1Q5T9C9 394 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 KIAA1161Q6NSJ0 714 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 SPRED2Q7Z698 418 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 LINC00471Q8N535 108 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 SETD6Q8TBK2 473 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 FGF11Q92914 225 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 PAWRQ96IZ0 340 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 NEDD4LQ96PU5 975 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 INSM2Q96T92 566 aaPredicted RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 SPATA5L1Q9BVQ7 753 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 PLA2G12AQ9BZM1 189 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 QRSL1Q9H0R6 528 aaKnown RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 OSGEPL1Q9H4B0 414 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 EGLN3Q9H6Z9 239 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 BCL2L10Q9HD36 194 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 IL23AQ9NPF7 189 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 CMAHPQ9Y471 501 aa13.5□□□□□ -0.25
USP44-203ENST00000537435 DNMT3AQ9Y6K1 912 aaPredicted RBP13.5□□□□□ -0.25
USP44-203ENST00000537435 IQCMA0A1B0GVH7 501 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 MAN2B1O00754 1011 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 LATO43561 262 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 HMGN2P05204 90 aaKnown RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 ACP5P13686 325 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 CPEP16870 476 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 SMSP52788 366 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 TAS2R38P59533 333 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 EFNB1P98172 346 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 SF3B4Q15427 424 aaKnown RBP eCLIP13.49□□□□□ -0.25
USP44-203ENST00000537435 MLF2Q15773 248 aaPredicted RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 FLYWCH1Q4VC44 716 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 ENTPD8Q5MY95 495 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 KIAA1211LQ6NV74 962 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 KIF18BQ86Y91 864 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 RAB42Q8N4Z0 105 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 Q8N9G6 341 aaPredicted RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 OR2A1Q8NGT9 310 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 SLC25A46Q96AG3 418 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 RAB7BQ96AH8 199 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 SRRQ9GZT4 340 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 NEK6Q9HC98 313 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 PRSS16Q9NQE7 514 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 MBNL1Q9NR56 388 aaKnown RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 OR1A2Q9Y585 309 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 SPIN1Q9Y657 262 aaPredicted RBP13.49□□□□□ -0.25
USP44-203ENST00000537435 SLC35F4A4IF30 521 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 TBC1D3BA6NDS4 549 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 PGRMC2O15173 223 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 PCDH8O95206 1070 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 CLEC2LP0C7M8 214 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 ACADMP11310 421 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 MYL12AP19105 171 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 MAN2A2P49641 1150 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 CKAP5Q14008 2032 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 SLC9A5Q14940 896 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 GPAT3Q53EU6 434 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 ARMC4Q5T2S8 1044 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 OR2G6Q5TZ20 316 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 NXNL2Q5VZ03 156 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 C22orf42Q6IC83 251 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 CCDC116Q8IYX3 515 aa13.49□□□□□ -0.25
USP44-203ENST00000537435 OR8K5Q8NH50 307 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms