RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 C1QTNF3Q9BXJ4 246 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 ANGPTL4Q9BY76 406 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 SLC6A15Q9H2J7 730 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 PROK2Q9HC23 129 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 Q9UFV3 132 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 NFU1Q9UMS0 254 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 C15orf41Q9Y2V0 281 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 PCDHA9Q9Y5H5 950 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 ZNF780BQ9Y6R6 833 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 EML6Q6ZMW3 1958 aa12.04□□□□□ -0.48
RTN3-207ENST00000536011 CCDC151A5D8V7 595 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 A8MT66 165 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 DVL2O14641 736 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 ACOX3O15254 700 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 ERAL1O75616 437 aaKnown RBP12.03□□□□□ -0.48
RTN3-207ENST00000536011 LRATO95237 230 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 PDYNP01213 254 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 ABHD2P08910 425 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 ABCD3P28288 659 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 TRPC1P48995 793 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 CDK9P50750 372 aaKnown RBP12.03□□□□□ -0.48
RTN3-207ENST00000536011 KRTAP10-9P60411 292 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 DCAF7P61962 342 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 PSPHP78330 225 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 MAP4K2Q12851 820 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 CSTF3Q12996 717 aaKnown RBP12.03□□□□□ -0.48
RTN3-207ENST00000536011 DUSP8Q13202 625 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 RASA2Q15283 850 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 TOMM20Q15388 145 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 TEX35Q5T0J7 233 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 LETMD1Q6P1Q0 360 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 LACC1Q8IV20 430 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 ADIPOR1Q96A54 375 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 TMEM41AQ96HV5 264 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 BRINP2Q9C0B6 783 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 METTL7AQ9H8H3 244 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 PRODH2Q9UF12 536 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 BCAP29Q9UHQ4 241 aa12.03□□□□□ -0.48
RTN3-207ENST00000536011 DMGDHQ9UI17 866 aaKnown RBP12.03□□□□□ -0.48
RTN3-207ENST00000536011 ANKHD1Q8IWZ3 2542 aaKnown RBP12.03□□□□□ -0.48
RTN3-207ENST00000536011 HIVEP1P15822 2718 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 KIF2AO00139 706 aaPredicted RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 PPM1BO75688 479 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 ESRRBO95718 433 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 HPNP05981 417 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 CT62P0C5K7 136 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 RHOXF2BP0C7M4 288 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 CD1EP15812 388 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 POU3F2P20265 443 aaPredicted RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 GPX3P22352 226 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 ADH7P40394 386 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 ALDH9A1P49189 494 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 RIPPLY3P57055 190 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 CLCQ05315 142 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 PLCXD2Q0VAA5 305 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 GALNT1Q10472 559 aaPredicted RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 SNTA1Q13424 505 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 ACSF3Q4G176 576 aaPredicted RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 UBAP2Q5T6F2 1119 aaKnown RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 TMEM81Q6P7N7 255 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 ARSKQ6UWY0 536 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 TMEM64Q6YI46 380 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 SPNS3Q6ZMD2 512 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 TRMT10CQ7L0Y3 403 aaKnown RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 NUP54Q7Z3B4 507 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 SLC22A9Q8IVM8 553 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 GBP7Q8N8V2 638 aaPredicted RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 NOA1Q8NC60 698 aaKnown RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 UCN3Q969E3 161 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 ERP27Q96DN0 273 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 LCORQ96JN0 433 aaPredicted RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 ZNF382Q96SR6 550 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 SHCBP1LQ9BZQ2 653 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 GIMAP4Q9NUV9 329 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 FOXD3Q9UJU5 478 aaPredicted RBP12.02□□□□□ -0.49
RTN3-207ENST00000536011 CES1P1Q9UKY3 287 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 EDARQ9UNE0 448 aa12.02□□□□□ -0.49
RTN3-207ENST00000536011 A0A1W2PS29 197 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 BCAS2O75934 225 aaPredicted RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 SUPT7LO94864 414 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 EPPINO95925 133 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 IL2RAP01589 272 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 ECHS1P30084 290 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 HMOX2P30519 316 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 TIMP3P35625 211 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 HSD17B3P37058 310 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 FEN1P39748 380 aaKnown RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 CASP3P42574 277 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 ASCL1P50553 236 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 CDH13P55290 713 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 CRYZQ08257 329 aaKnown RBP12.01□□□□□ -0.49
RTN3-207ENST00000536011 PRICKLE4Q2TBC4 344 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 SPIN4Q56A73 249 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 NHSL2Q5HYW2 709 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 TIGD3Q6B0B8 471 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 SLC30A6Q6NXT4 461 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 TIFABQ6ZNK6 161 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 GPRIN3Q6ZVF9 776 aa12.01□□□□□ -0.49
RTN3-207ENST00000536011 IFT20Q8IY31 132 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms