RNA–Protein interactions for RNA: ENST00000536003.5

PAAF1-207, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-207ENST00000536003 CNIH4Q9P003 139 aa14.08□□□□□ -0.15
PAAF1-207ENST00000536003 TBK1Q9UHD2 729 aa14.08□□□□□ -0.15
PAAF1-207ENST00000536003 ACAD8Q9UKU7 415 aa14.08□□□□□ -0.15
PAAF1-207ENST00000536003 EMCNQ9ULC0 261 aa14.08□□□□□ -0.15
PAAF1-207ENST00000536003 NPFFR2Q9Y5X5 522 aa14.08□□□□□ -0.15
PAAF1-207ENST00000536003 SPG11Q96JI7 2443 aa14.08□□□□□ -0.15
PAAF1-207ENST00000536003 A0A0G2JNJ9 132 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 HCN1O60741 890 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 CBX7O95931 251 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 ABCD3P28288 659 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 MSX1P28360 303 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 ALDH9A1P49189 494 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 RAE1P78406 368 aaKnown RBP14.08□□□□□ -0.16
PAAF1-207ENST00000536003 RASA2Q15283 850 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 GPRIN3Q6ZVF9 776 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 IFT20Q8IY31 132 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 CEP112Q8N8E3 955 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 ZNF597Q96LX8 424 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 ZNF681Q96N22 645 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 ANKRA2Q9H9E1 313 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 PSMC3IPQ9P2W1 217 aaPredicted RBP14.08□□□□□ -0.16
PAAF1-207ENST00000536003 VPS29Q9UBQ0 182 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 Q9UFV3 132 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 PLLPQ9Y342 182 aa14.08□□□□□ -0.16
PAAF1-207ENST00000536003 MAP1AP78559 2803 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-207ENST00000536003 VPS13CQ709C8 3753 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 GOLGA6L10A6NI86 522 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 KIF2AO00139 706 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-207ENST00000536003 NME6O75414 186 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-207ENST00000536003 PYGBP11216 843 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 TAC1P20366 129 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 ATP5F1P24539 256 aaPredicted RBP14.07□□□□□ -0.16
PAAF1-207ENST00000536003 GDF1P27539 372 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 HMGCS1Q01581 520 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 TRMT12Q53H54 448 aaKnown RBP14.07□□□□□ -0.16
PAAF1-207ENST00000536003 HLA-DQA1Q5Y7H0 255 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 ACAD11Q709F0 780 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 LIX1LQ8IVB5 337 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 NEIL3Q8TAT5 605 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 SPPL2AQ8TCT8 520 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 SARAFQ96BY9 339 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 UBQLN3Q9H347 655 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 GSTO2Q9H4Y5 243 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 EHD3Q9NZN3 535 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 ZNF639Q9UID6 485 aa14.07□□□□□ -0.16
PAAF1-207ENST00000536003 A0A1W2PPM1 405 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 ANKRD33BA6NCL7 494 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 UBFD1O14562 309 aaKnown RBP14.06□□□□□ -0.16
PAAF1-207ENST00000536003 WDR1O75083 606 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 SHBGP04278 402 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 IL3P08700 152 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 PCSK2P16519 638 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 IMPDH1P20839 514 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 SSTR2P30874 369 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 CASP3P42574 277 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 PRKAA2P54646 552 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 FOXA1P55317 472 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 WNT3P56703 355 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 TLE4Q04727 773 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 CSTF3Q12996 717 aaKnown RBP14.06□□□□□ -0.16
PAAF1-207ENST00000536003 LCP2Q13094 533 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 C1orf185Q5T7R7 199 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 LGSNQ5TDP6 509 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 C6orf163Q5TEZ5 329 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 SEM1Q6ZVN7 128 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 C17orf47Q8NEP4 570 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 OR7G1Q8NGA0 311 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 OR10Q1Q8NGQ4 319 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 CHTF18Q8WVB6 975 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 CTHRC1Q96CG8 243 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 L3HYPDHQ96EM0 354 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 C14orf79Q96F83 325 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 APIPQ96GX9 242 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 EBPLQ9BY08 206 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 ACKR4Q9NPB9 350 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 ALKBH4Q9NXW9 302 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 UTS2RQ9UKP6 389 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 TIMM22Q9Y584 194 aa14.06□□□□□ -0.16
PAAF1-207ENST00000536003 ZNF469Q96JG9 3925 aaPredicted RBP14.06□□□□□ -0.16
PAAF1-207ENST00000536003 G3V2L1 256 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 TP53I11O14683 189 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 PCDH7O60245 1069 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 KRT6AP02538 564 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 KRT6BP04259 564 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 ABCB1P08183 1280 aaPredicted RBP14.05□□□□□ -0.16
PAAF1-207ENST00000536003 CSNK2A2P19784 350 aaPredicted RBP14.05□□□□□ -0.16
PAAF1-207ENST00000536003 ELAVL4P26378 380 aaKnown RBP14.05□□□□□ -0.16
PAAF1-207ENST00000536003 KRT6CP48668 564 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 TMED10P49755 219 aaKnown RBP14.05□□□□□ -0.16
PAAF1-207ENST00000536003 NRG3P56975 720 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 MAP4K2Q12851 820 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 DCST1Q5T197 706 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 WLSQ5T9L3 541 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 SCIMPQ6UWF3 145 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 ULK2Q8IYT8 1036 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 OR52R1Q8NGF1 315 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 METTL6Q8TCB7 284 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 NTNG2Q96CW9 530 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 GNRHR2Q96P88 292 aa14.05□□□□□ -0.16
PAAF1-207ENST00000536003 ANGPTL4Q9BY76 406 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms