RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 OVGP1Q12889 678 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 SGCBQ16585 318 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 HFEQ30201 348 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 LCE3AQ5TA76 89 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 STEAP1BQ6NZ63 245 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 SFRP1Q8N474 314 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 CAPNS2Q96L46 248 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 MAGEB18Q96M61 343 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 DDX50Q9BQ39 737 aaKnown RBP3.62□□□□□ -1.83
PRKDC-205ENST00000535375 ACAT2Q9BWD1 397 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 FUNDC2Q9BWH2 189 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 AKIRIN1Q9H9L7 192 aaPredicted RBP3.62□□□□□ -1.83
PRKDC-205ENST00000535375 MAGEF1Q9HAY2 307 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 ADGRL4Q9HBW9 690 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 DDX28Q9NUL7 540 aaKnown RBP3.62□□□□□ -1.83
PRKDC-205ENST00000535375 CYP39A1Q9NYL5 469 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 APPL1Q9UKG1 709 aa3.62□□□□□ -1.83
PRKDC-205ENST00000535375 NOTCH2Q04721 2471 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 PRRC2AP48634 2157 aaKnown RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 A0A0A6YYC8 382 aaPredicted RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 A0A0U1RQG5 324 aaPredicted RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 SMIM30A4D0T7 59 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 I3L1I5 382 aaPredicted RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 CACNB4O00305 520 aaPredicted RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 HDAC3O15379 428 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 GJB5O95377 273 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 SLC35E2P0CK97 266 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 STMN1P16949 149 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 UCP1P25874 307 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 CTNNB1P35222 781 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 TEFQ10587 303 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 NPRL3Q12980 569 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 CAPRIN1Q14444 709 aaKnown RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 TAF3Q5VWG9 929 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 ASRGL1Q7L266 308 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 GPR142Q7Z601 462 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 ZSCAN30Q86W11 494 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 SIDT2Q8NBJ9 832 aaKnown RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 LPCAT1Q8NF37 534 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 RDH11Q8TC12 318 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 GLYATL1Q969I3 302 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 BIRC7Q96CA5 298 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 EPSTI1Q96J88 318 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 PIWIL1Q96J94 861 aaKnown RBP3.61□□□□□ -1.83
PRKDC-205ENST00000535375 COG3Q96JB2 828 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 RPGRIP1Q96KN7 1286 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 DNAJC11Q9NVH1 559 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 TUBGCP4Q9UGJ1 667 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 KIF7Q2M1P5 1343 aa3.61□□□□□ -1.83
PRKDC-205ENST00000535375 CDX4O14627 284 aaPredicted RBP3.6□□□□□ -1.83
PRKDC-205ENST00000535375 ZBTB14O43829 449 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 VEGFDO43915 354 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 LYPD3O95274 346 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 APBB3O95704 486 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 MGMTP16455 207 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 FERP16591 822 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 TKTL1P51854 596 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 NME5P56597 212 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 STARD6P59095 220 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 HAGHQ16775 308 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 ISXQ2M1V0 245 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 SHROOM1Q2M3G4 852 aaPredicted RBP3.6□□□□□ -1.83
PRKDC-205ENST00000535375 IFI44LQ53G44 452 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 C2orf83Q53S99 150 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 MFSD7Q6UXD7 560 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 STOX1Q6ZVD7 989 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 UBQLNLQ8IYU4 475 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 ARL10Q8N8L6 244 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 RNASE8Q8TDE3 154 aaKnown RBP3.6□□□□□ -1.83
PRKDC-205ENST00000535375 TFB1MQ8WVM0 346 aaKnown RBP3.6□□□□□ -1.83
PRKDC-205ENST00000535375 ATP6V0A1Q93050 837 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 FAF2Q96CS3 445 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 FAM173AQ9BQD7 235 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 OSBPL8Q9BZF1 889 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 VPS54Q9P1Q0 977 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 TRPC4Q9UBN4 977 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 EMCNQ9ULC0 261 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 STX8Q9UNK0 236 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 DIMT1Q9UNQ2 313 aaKnown RBP3.6□□□□□ -1.83
PRKDC-205ENST00000535375 ABCC9O60706 1549 aa3.6□□□□□ -1.83
PRKDC-205ENST00000535375 COL16A1Q07092 1604 aaPredicted RBP3.59□□□□□ -1.83
PRKDC-205ENST00000535375 IGHV3-35A0A0C4DH35 117 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 C5orf51A6NDU8 294 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 A8MX80 341 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 LAMP1P11279 417 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 PVRP15151 417 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 ACP1P24666 158 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 ACADSBP45954 432 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 HLCSP50747 726 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 ARF5P84085 180 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 KRT31Q15323 416 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 TGIF1Q15583 401 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 TCHHL1Q5QJ38 904 aaPredicted RBP3.59□□□□□ -1.83
PRKDC-205ENST00000535375 PRAMEF8Q5VWM4 474 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 PRSS42Q7Z5A4 293 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 ZNF619Q8N2I2 560 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 Q8N9G6 341 aaPredicted RBP3.59□□□□□ -1.83
PRKDC-205ENST00000535375 CASD1Q96PB1 797 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 TRIM9Q9C026 710 aa3.59□□□□□ -1.83
PRKDC-205ENST00000535375 DCLRE1BQ9H816 532 aa3.59□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms