RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 COX7A2P14406 83 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 TCEA1P23193 301 aaKnown RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 ABCD3P28288 659 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 CRHR1P34998 444 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ARFIP1P53367 373 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 PHEXP78562 749 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ART3Q13508 389 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 RASA2Q15283 850 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 NTRK2Q16620 822 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 EIPR1Q53HC9 387 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ZNF385BQ569K4 471 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ZNF628Q5EBL2 1059 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 SLC22A10Q63ZE4 541 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ZNF585AQ6P3V2 769 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 OPN5Q6U736 354 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 Q6ZSR9 355 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 FRMD7Q6ZUT3 714 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 MCEMP1Q8IX19 187 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ZNF808Q8N4W9 903 aaPredicted RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 FAM98AQ8NCA5 519 aaKnown RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 OR5L2Q8NGL0 311 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 CLHC1Q8NHS4 586 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.83□□□□□ -17e-6■■■■□ 22
SSBP3-215ENST00000533946 ACMSDQ8TDX5 336 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 AENQ8WTP8 325 aaKnown RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 HGDQ93099 445 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 GFM2Q969S9 779 aaKnown RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 TRIM44Q96DX7 344 aaPredicted RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 SMC6Q96SB8 1091 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 KLHDC3Q9BQ90 382 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 FAM173AQ9BQD7 235 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 CENPKQ9BS16 269 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 TRIM8Q9BZR9 551 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ZNF703Q9H7S9 590 aaPredicted RBP8.83□□□□□ -1
SSBP3-215ENST00000533946 BRF2Q9HAW0 419 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 IL1RL2Q9HB29 575 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 OXSMQ9NWU1 459 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 BCAP29Q9UHQ4 241 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 BAIAP2L1Q9UHR4 511 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ADAM29Q9UKF5 820 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 UTS2RQ9UKP6 389 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 SNX6Q9UNH7 406 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 ENTPD4Q9Y227 616 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 NPFFR2Q9Y5X5 522 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 CCDC168Q8NDH2 2452 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 HIVEP1P15822 2718 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 SPG11Q96JI7 2443 aa8.83□□□□□ -1
SSBP3-215ENST00000533946 NUP214P35658 2090 aaPredicted RBP8.82□□□□□ -1
SSBP3-215ENST00000533946 AKAP6Q13023 2319 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 A0A0G2JNJ9 132 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 FAM90A27PA6NNH2 459 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 E9PLN8 166 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 ULK1O75385 1050 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 P04436 131 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 CT45A8P0DMV1 189 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 CT45A9P0DMV2 189 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 GLI4P10075 376 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 CPA3P15088 417 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 KRT15P19012 456 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 TAC1P20366 129 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 TNFRSF8P28908 595 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 HMOX2P30519 316 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 ALDH3A1P30838 453 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 TIA1P31483 386 aaKnown RBP eCLIP8.82□□□□□ -11e-6■■■■■ 29.2
SSBP3-215ENST00000533946 CASP3P42574 277 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 PER3P56645 1201 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 KCNJ2P63252 427 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 RBPJQ06330 500 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 TFF3Q07654 80 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 C2orf80Q0P641 193 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 MAP4K2Q12851 820 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 MPP2Q14168 576 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 KIAA0040Q15053 153 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 ERCC6LQ2NKX8 1250 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 CT45A2Q5DJT8 189 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 OR5M10Q6IEU7 315 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 FAM71E1Q6IPT2 247 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 BNC2Q6ZN30 1099 aaPredicted RBP8.82□□□□□ -1
SSBP3-215ENST00000533946 SLC29A4Q7RTT9 530 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 GALNT10Q86SR1 603 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 TDRPQ86YL5 185 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 LRRC25Q8N386 305 aaPredicted RBP8.82□□□□□ -1
SSBP3-215ENST00000533946 VWA5B2Q8N398 1253 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 FBXW8Q8N3Y1 598 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 BANPQ8N9N5 519 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 GOLM1Q8NBJ4 401 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 POGLUT1Q8NBL1 392 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 NAXEQ8NCW5 288 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 MYRIPQ8NFW9 859 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 SPPL2AQ8TCT8 520 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 AGR3Q8TD06 166 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 DIO2Q92813 273 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 CIDECQ96AQ7 238 aaPredicted RBP8.82□□□□□ -1
SSBP3-215ENST00000533946 C3orf30Q96M34 536 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 RILPQ96NA2 401 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 VKORC1Q9BQB6 163 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 ALKBH4Q9NXW9 302 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 Q9UFV3 132 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 FETUBQ9UGM5 382 aa8.82□□□□□ -1
SSBP3-215ENST00000533946 DCDC2Q9UHG0 476 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms