RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 ST6GAL2Q96JF0 529 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 GPA33Q99795 319 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 SGPP1Q9BX95 441 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 POLMQ9NP87 494 aaPredicted RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 SEC14L4Q9UDX3 406 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 RPL36Q9Y3U8 105 aaKnown RBP18.29■□□□□ 0.52
CAPN1-226ENST00000533820 CMAHPQ9Y471 501 aa18.29■□□□□ 0.52
CAPN1-226ENST00000533820 A0A075B6Q4 140 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 HMGN4O00479 90 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 CAPN5O15484 640 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-226ENST00000533820 PDPK1O15530 556 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 UGT2B17O75795 530 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 GPC1P35052 558 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 ETV6P41212 452 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 ILKQ13418 452 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 MRGPRX3Q96LB0 322 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 TREX2Q9BQ50 279 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-226ENST00000533820 TM7SF3Q9NS93 570 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 TXNL4BQ9NX01 149 aaKnown RBP18.28■□□□□ 0.52
CAPN1-226ENST00000533820 COMMD3Q9UBI1 195 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 ZNF670-ZNF695F2Z2N8 137 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 SHOXO15266 292 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 LZTS3O60299 673 aaPredicted RBP18.28■□□□□ 0.52
CAPN1-226ENST00000533820 CH25HO95992 272 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 TSPAN19P0C672 248 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 NR2F1P10589 423 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 NUDT1P36639 197 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 SNRPD2P62316 118 aaKnown RBP18.28■□□□□ 0.52
CAPN1-226ENST00000533820 FLYWCH1Q4VC44 716 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 YIF1BQ5BJH7 314 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 PDZK1Q5T2W1 519 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 NANOGP1Q8N7R0 232 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 APOBEC4Q8WW27 367 aaKnown RBP18.28■□□□□ 0.52
CAPN1-226ENST00000533820 NELL2Q99435 816 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 SRRQ9GZT4 340 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 EGLN3Q9H6Z9 239 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 MCCC2Q9HCC0 563 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 ZC4H2Q9NQZ6 224 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 KCND3Q9UK17 655 aa18.28■□□□□ 0.52
CAPN1-226ENST00000533820 DSPPQ9NZW4 1301 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 GIMAP1-GIMAP5A0A087WTJ2 511 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 CXCL14O95715 111 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 RPL3P39023 403 aaKnown RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 CD79BP40259 229 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 RPS25P62851 125 aaKnown RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 TEKQ02763 1124 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 ZNF267Q14586 743 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 SNAPC1Q16533 368 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 AMIGO1Q86WK6 493 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 ANKRD53Q8N9V6 530 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 OR8J1Q8NGP2 316 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 ZNF689Q96CS4 500 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 GIMAP5Q96F15 307 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 TOE1Q96GM8 510 aaKnown RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 SERHL2Q9H4I8 314 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 TDP1Q9NUW8 608 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 AP1M2Q9Y6Q5 423 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 PRAMEF27A3QJZ7 478 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 ANTXRLA6NF34 631 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 TBX6O95947 436 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 MMP11P24347 488 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 BUD31P41223 144 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 CCT3P49368 545 aaKnown RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 AP2S1P53680 142 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 CRTC2Q53ET0 693 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 DPPA4Q7L190 304 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 TRIM69Q86WT6 500 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 TTLQ8NG68 377 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 SLC9A6Q92581 669 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 TM4SF18Q96CE8 201 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 FNDC11Q9BVV2 318 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 C11orf54Q9H0W9 315 aaPredicted RBP18.27■□□□□ 0.52
CAPN1-226ENST00000533820 ANKRA2Q9H9E1 313 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 C3orf14Q9HBI5 128 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 IL20RAQ9UHF4 553 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 MGAT4BQ9UQ53 548 aa18.27■□□□□ 0.52
CAPN1-226ENST00000533820 WASH3PC4AMC7 463 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 SLC9A3R1O14745 358 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-226ENST00000533820 SOD1P00441 154 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 EPHX1P07099 455 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 PAMR1Q6UXH9 720 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 ZER1Q7Z7L7 766 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 OR4K5Q8NGD3 323 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 OR52I1Q8NGK6 324 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 MIXL1Q9H2W2 232 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 CPNE7Q9UBL6 633 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 MN1Q10571 1320 aaPredicted RBP18.26■□□□□ 0.51
CAPN1-226ENST00000533820 HYKKA2RU49 373 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 TMPRSS11DO60235 418 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 DDCP20711 480 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 CBX5P45973 191 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 INSL4Q14641 139 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 ZNF750Q32MQ0 723 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 SYT14P1Q58G82 188 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 SHEQ5VZ18 495 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 LHFPL3Q86UP9 236 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 NEURL3Q96EH8 262 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 ZSWIM3Q96MP5 696 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 PLA2G12AQ9BZM1 189 aa18.26■□□□□ 0.51
CAPN1-226ENST00000533820 A8MVJ9 347 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms