RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 TTLL9Q3SXZ7 439 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ZNF324BQ6AW86 544 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ANKRD26P1Q6NSI1 321 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 RNF165Q6ZSG1 346 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 KCTD8Q6ZWB6 473 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ZBTB46Q86UZ6 589 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 CALHM3Q86XJ0 350 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 DNAJC22Q8N4W6 341 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ZNF655Q8N720 491 aaPredicted RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 SLC47A1Q96FL8 570 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 LMF1Q96S06 567 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 DCUN1D5Q9BTE7 237 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 NDC1Q9BTX1 674 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 LHPPQ9H008 270 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 WDR54Q9H977 334 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 PARVBQ9HBI1 364 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 CHST11Q9NPF2 352 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ASIC5Q9NY37 505 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 DHCR7Q9UBM7 475 aaKnown RBP7.73□□□□□ -1.17
NEDD8-207ENST00000533242 ICKQ9UPZ9 632 aa7.73□□□□□ -1.17
NEDD8-207ENST00000533242 C2CD3Q4AC94 2353 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 SNRNP200O75643 2136 aaKnown RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CFAP99D6REC4 459 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GFYI3L273 518 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 SOCS6O14544 535 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 DEAF1O75398 565 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ETHE1O95571 254 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 SERPINA1P01009 418 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CST1P01037 141 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 HTR1AP08908 422 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 THRBP10828 461 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ATP1B2P14415 290 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 COX6B1P14854 86 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 TDGF1P3P51864 188 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CLDN8P56748 225 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 PPP2R2BQ00005 443 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CHRNB3Q05901 458 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 RPA4Q13156 261 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 MFAP5Q13361 173 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 SLC9A5Q14940 896 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ZIC1Q15915 447 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 INAQ16352 499 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ZNF630Q2M218 657 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CTU2Q2VPK5 515 aaKnown RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 DEFB110Q30KQ9 67 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 PGS1Q32NB8 556 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ZNF658BQ4V348 819 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 FAM98BQ52LJ0 330 aaKnown RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GPR107Q5VW38 600 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 OR4F3Q6IEY1 312 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 MTFR2Q6P444 385 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GPR141Q7Z602 305 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GPR180Q86V85 440 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ERI1Q8IV48 349 aaKnown RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 MICU2Q8IYU8 434 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CLEC4FQ8N1N0 589 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ZNF808Q8N4W9 903 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 TNIP2Q8NFZ5 429 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 OR7A2PQ8NGA2 310 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 OR2A14Q96R47 310 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ZBTB18Q99592 522 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 NRTNQ99748 197 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 C19orf43Q9BQ61 176 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 XKR8Q9H6D3 395 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CXorf21Q9HAI6 301 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 SLC22A11Q9NSA0 550 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 AASSQ9UDR5 926 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 PLCL2Q9UPR0 1127 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 CRYBG3Q68DQ2 2970 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 FBN2P35556 2912 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 A0A0J9YY10 115 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ARHGEF33A8MVX0 844 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 H3BMQ9 156 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GSTA4O15217 222 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 HCRTR1O43613 425 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ALOX12BO75342 701 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 KRT6AP02538 564 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ALBP02768 609 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 KRT6BP04259 564 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GSTM1P09488 218 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 MATN1P21941 496 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GCGRP47871 477 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 KRT6CP48668 564 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 FOXL2P58012 376 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 HPCAP84074 193 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GSTM4Q03013 218 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 SLC5A12Q1EHB4 618 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 ZBED5Q49AG3 693 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 FGD3Q5JSP0 725 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 LRIF1Q5T3J3 769 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 XAF1Q6GPH4 301 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 RPTNQ6XPR3 784 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 OVCH1Q7RTY7 1134 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 TRIM73Q86UV7 250 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 TMEM151BQ8IW70 566 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 L3MBTL4Q8NA19 623 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 GLB1L3Q8NCI6 653 aaPredicted RBP7.72□□□□□ -1.17
NEDD8-207ENST00000533242 NCLNQ969V3 563 aa7.72□□□□□ -1.17
NEDD8-207ENST00000533242 FAM162AQ96A26 154 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms