RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 GCNT2Q8N0V5 402 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 OR14L1PQ8NHC6 308 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 ZNF473Q8WTR7 871 aaKnown RBP8.18□□□□□ -1.1
VPS11-203ENST00000529545 TMEM171Q8WVE6 324 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 RGMAQ96B86 450 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 WFIKKN1Q96NZ8 548 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 UCN2Q96RP3 112 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 SLC39A3Q9BRY0 314 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 GSX2Q9BZM3 304 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 CXorf56Q9H5V9 222 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 ACTR8Q9H981 624 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 LZTFL1Q9NQ48 299 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 CD274Q9NZQ7 290 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 ADGRE2Q9UHX3 823 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 DSCAMO60469 2012 aa8.18□□□□□ -1.1
VPS11-203ENST00000529545 TAPBPO15533 448 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 CCNT2O60583 730 aaKnown RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 BANF1O75531 89 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 CBR3O75828 277 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 TP53P04637 393 aaPredicted RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 CRHP06850 196 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 SLC35E2BP0CK96 405 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 SLC35E2P0CK97 266 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 CD79BP40259 229 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 CASP2P42575 452 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 KCNJ5P48544 419 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 TAS2R39P59534 338 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 RPS13P62277 151 aaKnown RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 DMTNQ08495 405 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 FAM27E3Q08E93 113 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 ILF2Q12905 390 aaKnown RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 ZNF460Q14592 562 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 TBCCQ15814 346 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 CYP1B1Q16678 543 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 HP1BP3Q5SSJ5 553 aaPredicted RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 DEPDC1Q5TB30 811 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 C18orf63Q68DL7 685 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 OR2A2Q6IF42 318 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 SLC30A6Q6NXT4 461 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 AAGABQ6PD74 315 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 CYP20A1Q6UW02 462 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 IFNEQ86WN2 208 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 PDIK1LQ8N165 341 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 ZCCHC7Q8N3Z6 543 aaKnown RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 CNEP1R1Q8N9A8 125 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 ANKRD49Q8WVL7 239 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 TMEM158Q8WZ71 300 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 ESAMQ96AP7 390 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 TMEM79Q9BSE2 394 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 SORBS1Q9BX66 1292 aaKnown RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 GRIP2Q9C0E4 1043 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 DERL2Q9GZP9 239 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 OR51B5Q9H339 312 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 POPDC3Q9HBV1 291 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 LYARQ9NX58 379 aaKnown RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 KLRF1Q9NZS2 232 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 ASIC3Q9UHC3 531 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 PTBP2Q9UKA9 531 aaKnown RBP8.17□□□□□ -1.1
VPS11-203ENST00000529545 MXRA5Q9NR99 2828 aa8.17□□□□□ -1.1
VPS11-203ENST00000529545 ZANQ9Y493 2812 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 GOLGA6L10A0A0M3HER8 536 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 A0A1W2PNV4 684 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 C16orf97H3BN30 126 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 PRAMEF4O60810 478 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 TMCC2O75069 709 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 PRKRAO75569 313 aaKnown RBP8.16□□□□□ -1.1
VPS11-203ENST00000529545 PPM1BO75688 479 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 RHOXF2BP0C7M4 288 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 NR2F6P10588 404 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 POU2F1P14859 743 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 EPB42P16452 691 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 NAGAP17050 411 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 CD22P20273 847 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 PIK3R1P27986 724 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 SSTR4P31391 388 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 SOX18P35713 384 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 ELK3P41970 407 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 ARFIP1P53367 373 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 HNRNPH2P55795 449 aaKnown RBP8.16□□□□□ -1.1
VPS11-203ENST00000529545 ATP5J2P56134 94 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 PHEXP78562 749 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 MGAT5Q09328 741 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 DDX39BQ13838 428 aaKnown RBP8.16□□□□□ -1.1
VPS11-203ENST00000529545 FBXO48Q5FWF7 155 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 PRAMEF9Q5VWM5 478 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 HEPHL1Q6MZM0 1159 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 TRMT10BQ6PF06 316 aaKnown RBP8.16□□□□□ -1.1
VPS11-203ENST00000529545 LRRC70Q7Z2Q7 622 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 NUP54Q7Z3B4 507 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 ADGRE4PQ86SQ3 457 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 ZC3HC1Q86WB0 502 aaKnown RBP8.16□□□□□ -1.1
VPS11-203ENST00000529545 MED12LQ86YW9 2145 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 IGDCC3Q8IVU1 814 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 GALNT12Q8IXK2 581 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 LAS2Q8IYD9 372 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 PRR22Q8IZ63 422 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 SPC24Q8NBT2 197 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 C17orf47Q8NEP4 570 aa8.16□□□□□ -1.1
VPS11-203ENST00000529545 OR7G3Q8NG95 312 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms