RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 HLA-DQA1Q5Y7H0 255 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 ACSM2BQ68CK6 577 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 RIBC1Q8N443 379 aaPredicted RBP11.08□□□□□ -0.64
COPB1-206ENST00000529210 MARVELD2Q8N4S9 558 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 FAM76AQ8TAV0 307 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 PUM2Q8TB72 1066 aaKnown RBP eCLIP11.08□□□□□ -0.64
COPB1-206ENST00000529210 SPPL2AQ8TCT8 520 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 DOK4Q8TEW6 326 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 UBLCP1Q8WVY7 318 aaPredicted RBP11.08□□□□□ -0.64
COPB1-206ENST00000529210 ASB5Q8WWX0 329 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 HSPBAP1Q96EW2 488 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 APIPQ96GX9 242 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 ANGPTL4Q9BY76 406 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 HEY2Q9UBP5 337 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 ZNF780BQ9Y6R6 833 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 NINQ8N4C6 2090 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 FBN2P35556 2912 aa11.08□□□□□ -0.64
COPB1-206ENST00000529210 NCKAP5O14513 1909 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 PKDREJQ9NTG1 2253 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 DCHS2Q6V1P9 2916 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 G3V3Y1 287 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 TO15178 435 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 ERAL1O75616 437 aaKnown RBP11.07□□□□□ -0.64
COPB1-206ENST00000529210 SNX4O95219 450 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 ABCB1P08183 1280 aaPredicted RBP11.07□□□□□ -0.64
COPB1-206ENST00000529210 IFI6P09912 130 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 KRT15P19012 456 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 PRPH2P23942 346 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 ABCD3P28288 659 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 FEN1P39748 380 aaKnown RBP11.07□□□□□ -0.64
COPB1-206ENST00000529210 EMDP50402 254 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 NAGLUP54802 743 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 FOXA1P55317 472 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 PSPHP78330 225 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 RPP38P78345 283 aaKnown RBP11.07□□□□□ -0.64
COPB1-206ENST00000529210 DUSP2Q05923 314 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 DUSP8Q13202 625 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 CDSNQ15517 529 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 GXYLT1Q4G148 440 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 ZNF628Q5EBL2 1059 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 LIPMQ5VYY2 423 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 FAM219BQ5XKK7 198 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 FAM111BQ6SJ93 734 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 ACAD11Q709F0 780 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 MMP21Q8N119 569 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 C16orf78Q8WTQ4 265 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 SREK1Q8WXA9 508 aaKnown RBP11.07□□□□□ -0.64
COPB1-206ENST00000529210 SARAFQ96BY9 339 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 KLHL29Q96CT2 875 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 LCORQ96JN0 433 aaPredicted RBP11.07□□□□□ -0.64
COPB1-206ENST00000529210 SMC6Q96SB8 1091 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 TRMOQ9BU70 441 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 DOHHQ9BU89 302 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 ENKD1Q9H0I2 346 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 NXF5Q9H1B4 397 aaKnown RBP11.07□□□□□ -0.64
COPB1-206ENST00000529210 UBQLN3Q9H347 655 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 MID1IP1Q9NPA3 183 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 TAS2R7Q9NYW3 318 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 COQ3Q9NZJ6 369 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 PRODH2Q9UF12 536 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 MID2Q9UJV3 735 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 UTS2RQ9UKP6 389 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 DTX4Q9Y2E6 619 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 DLGAP4Q9Y2H0 992 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 TIMM22Q9Y584 194 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 LIPGQ9Y5X9 500 aa11.07□□□□□ -0.64
COPB1-206ENST00000529210 TRGV5A0A0B4J1U4 118 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 FIGNL2A6NMB9 653 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 NPIPA2E9PIF3 369 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 NPIPA3F8WFD2 350 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 COPEO14579 308 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 PLOD3O60568 738 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 WDR1O75083 606 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 PPM1BO75688 479 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 RSL1D1O76021 490 aaKnown RBP11.06□□□□□ -0.64
COPB1-206ENST00000529210 PDE9AO76083 593 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 SLITRK5O94991 958 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 IL3P08700 152 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 RFPL3SP0C7P2 107 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 UROSP10746 265 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 CPA3P15088 417 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 IGFBP2P18065 325 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 KRT4P19013 534 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 DDCP20711 480 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 ENDOUP21128 410 aaKnown RBP11.06□□□□□ -0.64
COPB1-206ENST00000529210 DRD5P21918 477 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 CASP3P42574 277 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 PPICP45877 212 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 SLCO1A2P46721 670 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 MAN2A2P49641 1150 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 KCNJ2P63252 427 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 HMGCS1Q01581 520 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 ZNF763Q0D2J5 394 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 SNTA1Q13424 505 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 PRAMEF20Q5VT98 475 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 FNDC7Q5VTL7 733 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 TMEM198Q66K66 360 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 C3P1Q6ZMU1 363 aa11.06□□□□□ -0.64
COPB1-206ENST00000529210 NCCRP1Q6ZVX7 275 aaPredicted RBP11.06□□□□□ -0.64
COPB1-206ENST00000529210 CCNYL1Q8N7R7 359 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms