RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ERN1O75460 977 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 KCNH1O95259 989 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ATP6V1G2O95670 118 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 COX6A1P12074 109 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SSTR4P31391 388 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GPR143P51810 404 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MNAT1P51948 309 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DUSP8Q13202 625 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NFYCQ13952 458 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EXOSC7Q15024 291 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SNCBQ16143 134 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MRGPREQ86SM8 312 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SPACA3Q8IXA5 215 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 VWA5B2Q8N398 1253 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR5AK3PQ8NH89 298 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR14A16Q8NHC5 309 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 FAM120BQ96EK7 910 aaKnown RBP11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SENP5Q96HI0 755 aaPredicted RBP11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 FBXL20Q96IG2 436 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PHF12Q96QT6 1004 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 LPAR4Q99677 370 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EFHD1Q9BUP0 239 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CNPPD1Q9BV87 410 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EFCAB1Q9HAE3 211 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NEUROD4Q9HD90 331 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TAS2R1Q9NYW7 299 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 VAPAQ9P0L0 249 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 VPS4AQ9UN37 437 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ERVK-19Q9WJR5 959 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SSUH2Q9Y2M2 353 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PCDHB14Q9Y5E9 798 aa11.33□□□□□ -0.6
TRAF3IP2-211ENST00000528599 A0A087WV62 115 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SAGE2PA6NJ88 616 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MASP2O00187 686 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 UPK1AO00322 258 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NME6O75414 186 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CBX7O95931 251 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CLPSP04118 112 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 IGKV3-11P04433 115 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZCCHC18P0CG32 403 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SOAT1P35610 550 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CCT3P49368 545 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TLE3Q04726 772 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 FUT7Q11130 342 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CAPRIN1Q14444 709 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TRMT5Q32P41 509 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ATP1A1-AS1Q5TC04 95 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TMEM64Q6YI46 380 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DHDDSQ86SQ9 333 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RAB43Q86YS6 212 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR2L13Q8N349 312 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PCYOX1LQ8NBM8 494 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 MORN4Q8NDC4 146 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC2A12Q8TD20 617 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZNF721Q8TF20 911 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DAZLQ92904 295 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NACC2Q96BF6 587 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 AURKBQ96GD4 344 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 IMMP1LQ96LU5 166 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC39A3Q9BRY0 314 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NUDT9Q9BW91 350 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DPH1Q9BZG8 443 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 OR8D2Q9GZM6 311 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EPS8L2Q9H6S3 715 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 P4HTMQ9NXG6 502 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NTMQ9P121 344 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PTGFRNQ9P2B2 879 aa11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 PPIEQ9UNP9 301 aaKnown RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C19orf53Q9UNZ5 99 aaPredicted RBP11.32□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZFYVE26Q68DK2 2539 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GYG2O15488 501 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NKX2-8O15522 239 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 EMC8O43402 210 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLITRK5O94991 958 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ANP32DO95626 131 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 IFI6P09912 130 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 UQCRC2P22695 453 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NUDT2P50583 147 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC26A5P58743 744 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ATP1A4Q13733 1029 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SPDYE7PQ495Y7 208 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C6orf163Q5TEZ5 329 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 NDUFAF7Q7L592 441 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZNF615Q8N8J6 731 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZFP90Q8TF47 636 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 LRRC58Q96CX6 371 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 SLC35A5Q9BS91 424 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CADM1Q9BY67 442 aaKnown RBP11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 TRIM8Q9BZR9 551 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 C3orf14Q9HBI5 128 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 ZCCHC3Q9NUD5 404 aaKnown RBP11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DDX18Q9NVP1 670 aaKnown RBP11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 FBXL4Q9UKA2 621 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CHD6Q8TD26 2715 aa11.31□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CACNA1BQ00975 2339 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 RNF103-CHMP3A0A140T963 221 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 CDC14CA4D256 554 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 B2RBV5 119 aa11.3□□□□□ -0.6
TRAF3IP2-211ENST00000528599 DYRK3O43781 588 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms