RNA–Protein interactions for RNA: ENST00000527887.1

CAPN1-212, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 348 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-212ENST00000527887 NR0B1P51843 470 aaKnown RBP13.05□□□□□ -0.32
CAPN1-212ENST00000527887 SLC18A1P54219 525 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 NUP107P57740 925 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 CLCQ05315 142 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 MAP4K2Q12851 820 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 SLC48A1Q6P1K1 146 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 COMMD6Q7Z4G1 85 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 OR10G3Q8NGC4 313 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 OR5M9Q8NGP3 310 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 UHMK1Q8TAS1 419 aaKnown RBP13.05□□□□□ -0.32
CAPN1-212ENST00000527887 FAM76AQ8TAV0 307 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 ACMSDQ8TDX5 336 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 EPS8L3Q8TE67 593 aaKnown RBP13.05□□□□□ -0.32
CAPN1-212ENST00000527887 ADIPOR1Q96A54 375 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 EXO5Q9H790 373 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 PROK2Q9HC23 129 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 MCCC2Q9HCC0 563 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 SSU72Q9NP77 194 aaKnown RBP13.05□□□□□ -0.32
CAPN1-212ENST00000527887 VPS29Q9UBQ0 182 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 CES1P1Q9UKY3 287 aa13.05□□□□□ -0.32
CAPN1-212ENST00000527887 TRIM3O75382 744 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-212ENST00000527887 TOXO94900 526 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 PDYNP01213 254 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 SBK3P0C264 359 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 GLI4P10075 376 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 CSNK2A2P19784 350 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-212ENST00000527887 NT5EP21589 574 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 MSX1P28360 303 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 SSTR4P31391 388 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 ZFP36L2P47974 494 aaKnown RBP13.04□□□□□ -0.32
CAPN1-212ENST00000527887 DCAF7P61962 342 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 TFF3Q07654 80 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 CSTF3Q12996 717 aaKnown RBP13.04□□□□□ -0.32
CAPN1-212ENST00000527887 SF3B4Q15427 424 aaKnown RBP eCLIP13.04□□□□□ -0.328e-8■■■□□ 15.1
CAPN1-212ENST00000527887 PRAMEF20Q5VT98 475 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 LETMD1Q6P1Q0 360 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 TMEM81Q6P7N7 255 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 SLC22A9Q8IVM8 553 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 SAMD14Q8IZD0 417 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-212ENST00000527887 CLYBLQ8N0X4 340 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 VWA5B2Q8N398 1253 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 LIX1Q8N485 282 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 GBP7Q8N8V2 638 aaPredicted RBP13.04□□□□□ -0.32
CAPN1-212ENST00000527887 OR10Q1Q8NGQ4 319 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 NEIL3Q8TAT5 605 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 SPPL2AQ8TCT8 520 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 DIO2Q92813 273 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF597Q96LX8 424 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 ANGPTL4Q9BY76 406 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 LIPGQ9Y5X9 500 aa13.04□□□□□ -0.32
CAPN1-212ENST00000527887 LRRC3CA6NJW4 275 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 AHRRA9YTQ3 701 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ACOX3O15254 700 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ULK1O75385 1050 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 BCAS2O75934 225 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-212ENST00000527887 SUPT7LO94864 414 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 GSTA1P08263 222 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 CELA3AP09093 270 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 KRT15P19012 456 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 IMPDH1P20839 514 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 S1PR1P21453 382 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ATP5F1P24539 256 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-212ENST00000527887 CDH13P55290 713 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 NAA20P61599 178 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 TLE4Q04727 773 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 GALNT1Q10472 559 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-212ENST00000527887 SLC25A35Q3KQZ1 300 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 SGO1Q5FBB7 561 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF678Q5SXM1 525 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 C1orf185Q5T7R7 199 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 RIPPLY2Q5TAB7 128 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 PACS2Q86VP3 889 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 CCDC71Q8IV32 467 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-212ENST00000527887 DMRTC2Q8IXT2 367 aaPredicted RBP13.03□□□□□ -0.32
CAPN1-212ENST00000527887 RPRMLQ8N4K4 120 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 DOK4Q8TEW6 326 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 UCN3Q969E3 161 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 TM4SF18Q96CE8 201 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ERP27Q96DN0 273 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 HSPBAP1Q96EW2 488 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF382Q96SR6 550 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 SHCBP1LQ9BZQ2 653 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 FARSBQ9NSD9 589 aaKnown RBP13.03□□□□□ -0.32
CAPN1-212ENST00000527887 PRODH2Q9UF12 536 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 KCNN3Q9UGI6 736 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF639Q9UID6 485 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 FAM215AQ9Y5M1 114 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 ZNF780BQ9Y6R6 833 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 CSMD2Q7Z408 3487 aa13.03□□□□□ -0.32
CAPN1-212ENST00000527887 CT62P0C5K7 136 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 RFPL3SP0C7P2 107 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 DRD2P14416 443 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 ABCD3P28288 659 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 PEX19P40855 299 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 GSTM5P46439 218 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 PRKAA2P54646 552 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 PKNOX1P55347 436 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 MAGOHP61326 146 aaKnown RBP13.02□□□□□ -0.33
CAPN1-212ENST00000527887 PSPHP78330 225 aa13.02□□□□□ -0.33
CAPN1-212ENST00000527887 SNTA1Q13424 505 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms