RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 NXF2Q9GZY0 626 aaKnown RBP14.46□□□□□ -0.09
USH1C-207ENST00000527720 KCNK12Q9HB15 430 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 GIN1Q9NXP7 522 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 LIPT1Q9Y234 373 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 NCKAP1Q9Y2A7 1128 aa14.46□□□□□ -0.09
USH1C-207ENST00000527720 FANCMQ8IYD8 2048 aa14.46□□□□□ -0.1
USH1C-207ENST00000527720 METTL15A6NJ78 407 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 WASHC1A8K0Z3 465 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 H3BN98 237 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 M0R3H8 397 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 ADAM23O75077 832 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 STATHP02808 62 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 HNRNPCP07910 306 aaKnown RBP eCLIP14.45□□□□□ -0.1
USH1C-207ENST00000527720 CD40LGP29965 261 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 RHAGQ02094 409 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 PIN1Q13526 163 aaPredicted RBP14.45□□□□□ -0.1
USH1C-207ENST00000527720 NFATC4Q14934 902 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 OXA1LQ15070 435 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 NCF4Q15080 339 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 OCLNQ16625 522 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 TJAP1Q5JTD0 557 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 C18orf63Q68DL7 685 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 PODNL1Q6PEZ8 512 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 MTSS1LQ765P7 747 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 BTLAQ7Z6A9 289 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 NRROSQ86YC3 692 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 GJD3Q8N144 294 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 NT5CQ8TCD5 201 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 KLHL6Q8WZ60 621 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 SLC6A17Q9H1V8 727 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 NKX2-4Q9H2Z4 354 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 TBC1D29Q9UFV1 150 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 RPL36Q9Y3U8 105 aaKnown RBP14.45□□□□□ -0.1
USH1C-207ENST00000527720 ZNF780BQ9Y6R6 833 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 EPOPA6NHQ4 379 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 ENTPD6O75354 484 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 TGFBR1P36897 503 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 PPP2CBP62714 309 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 PPP2CAP67775 309 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 RGS1Q08116 209 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 SFSWAPQ12872 951 aaKnown RBP14.45□□□□□ -0.1
USH1C-207ENST00000527720 FOXD4Q12950 439 aaPredicted RBP14.45□□□□□ -0.1
USH1C-207ENST00000527720 TRIM16LQ309B1 348 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 SLC25A30Q5SVS4 291 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 C1orf94Q6P1W5 598 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 TMEM107Q6UX40 140 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 COMTD1Q86VU5 262 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 ELP4Q96EB1 424 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 ZNF681Q96N22 645 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 MGLLQ99685 303 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 ROGDIQ9GZN7 287 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 MKLN1Q9UL63 735 aa14.45□□□□□ -0.1
USH1C-207ENST00000527720 FUOMA2VDF0 154 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 POM121BA6NF01 834 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 TAF4O00268 1085 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 SOX14O95416 240 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 APBB3O95704 486 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 EPPINO95925 133 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 TP53P04637 393 aaPredicted RBP14.44□□□□□ -0.1
USH1C-207ENST00000527720 COL9A1P20849 921 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 GSTM3P21266 225 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 CSTF2P33240 577 aaKnown RBP eCLIP14.44□□□□□ -0.1
USH1C-207ENST00000527720 PPP5CP53041 499 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 RAB8AP61006 207 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 DUSP2Q05923 314 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 GPAT3Q53EU6 434 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 MFSD4BQ5TF39 518 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 SAMD14Q8IZD0 417 aaPredicted RBP14.44□□□□□ -0.1
USH1C-207ENST00000527720 NUP43Q8NFH3 380 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 OR4E2Q8NGC2 313 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 OR6T1Q8NGN1 323 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 SIPA1Q96FS4 1042 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 WDR92Q96MX6 357 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 TRNT1Q96Q11 434 aaKnown RBP14.44□□□□□ -0.1
USH1C-207ENST00000527720 OR7D2Q96RA2 312 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 IL4I1Q96RQ9 567 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 POLDIP3Q9BY77 421 aaKnown RBP14.44□□□□□ -0.1
USH1C-207ENST00000527720 TWSG1Q9GZX9 223 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 MAN2C1Q9NTJ4 1040 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 DAPK2Q9UIK4 370 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 CDH23Q9H251 3354 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 CCRL2O00421 344 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 KLF8O95600 359 aaPredicted RBP14.44□□□□□ -0.1
USH1C-207ENST00000527720 NR2F6P10588 404 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 FEN1P39748 380 aaKnown RBP14.44□□□□□ -0.1
USH1C-207ENST00000527720 MAN2A2P49641 1150 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 BCAP31P51572 246 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 MED22Q15528 200 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 ENTPD8Q5MY95 495 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 ENPP7Q6UWV6 458 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 ASPGQ86U10 573 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 MORN4Q8NDC4 146 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 OR4K5Q8NGD3 323 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 WDR36Q8NI36 951 aaKnown RBP14.44□□□□□ -0.1
USH1C-207ENST00000527720 OR1E3Q8WZA6 343 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 TMEM80Q96HE8 168 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 PRDM9Q9NQV7 894 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 LRP4O75096 1905 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 SCN3AQ9NY46 2000 aa14.44□□□□□ -0.1
USH1C-207ENST00000527720 MYO9BQ13459 2157 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms