RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 HDCP19113 662 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 COL9A1P20849 921 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 AK4P27144 223 aaPredicted RBP6.93□□□□□ -1.3
CTNND1-216ENST00000527467 ERVK-21P61565 698 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 WDR5P61964 334 aaKnown RBP6.93□□□□□ -1.3
CTNND1-216ENST00000527467 POM121L1PQ3SYA9 428 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 TMEM240Q5SV17 173 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 LIPKQ5VXJ0 399 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 TMEM126BQ8IUX1 230 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 ALDH16A1Q8IZ83 802 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 OR6N2Q8NGY6 317 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 RNF170Q96K19 258 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 ASB6Q9NWX5 421 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 MS4A12Q9NXJ0 267 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 RALYQ9UKM9 306 aaKnown RBP6.93□□□□□ -1.3
CTNND1-216ENST00000527467 CNTN6Q9UQ52 1028 aa6.93□□□□□ -1.3
CTNND1-216ENST00000527467 MRPL42Q9Y6G3 142 aaKnown RBP6.93□□□□□ -1.3
CTNND1-216ENST00000527467 KIAA0513O60268 411 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TBL1XO60907 577 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 S100A8P05109 93 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 STAG3L2P0CL84 134 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SLC2A1P11166 492 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 RAB3AP20336 220 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 BDNFP23560 247 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MSX1P28360 303 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 CNR2P34972 360 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MAXP61244 160 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 ARHGAP1Q07960 439 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 KLF1Q13351 362 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 CST9LP1Q5W188 147 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 GPR155Q7Z3F1 870 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 ZSWIM9Q86XI8 627 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 C4orf19Q8IY42 314 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 NAT16Q8N8M0 369 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 FBXO15Q8NCQ5 510 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 OR51G2Q8NGK0 314 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 ZCCHC10Q8TBK6 192 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 RBMXL1Q96E39 390 aaKnown RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MOCOSQ96EN8 888 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 PYURFQ96I23 114 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 OR52B2Q96RD2 323 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 CGREF1Q99674 301 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 ALG12Q9BV10 488 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 GLOD4Q9HC38 313 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MKS1Q9NXB0 559 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 VSX1Q9NZR4 365 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MRPL15Q9P015 296 aaKnown RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SLC6A5Q9Y345 797 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SIT1Q9Y3P8 196 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TMEM14AQ9Y6G1 99 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 H0YAE9 185 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TMX2-CTNND1H3BSU7 103 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 CYB5BO43169 146 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TNFSF12O43508 249 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TRAF3IP2O43734 574 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SLC37A4O43826 429 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 EPOP01588 193 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 H2BFMP0C1H6 154 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 ZNF865P0CJ78 1059 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 M6PRP20645 277 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 EFNA1P20827 205 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 DRD5P21918 477 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 HLA-FP30511 346 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TGM4P49221 684 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 ZNF836Q6ZNA1 936 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TMPRSS9Q7Z410 1059 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 TMEM200AQ86VY9 491 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 PLA2G15Q8NCC3 412 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 HOXB13Q92826 284 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 FOXJ1Q92949 421 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SLC35C1Q96A29 364 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 EMID1Q96A84 441 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 FBXL20Q96IG2 436 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 PKP2Q99959 881 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SLC35A5Q9BS91 424 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MROQ9BYG7 248 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 PTTG3PQ9NZH4 202 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 HPSEQ9Y251 543 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SLC22A14Q9Y267 594 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 A0A1W2PQ67 120 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 IQCF5A8MTL0 148 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 C8GP07360 202 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 UGT2B7P16662 529 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 EPHA1P21709 976 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SPAM1P38567 509 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 CXCL12P48061 93 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 FLI1Q01543 452 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 KCNJ8Q15842 424 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 KIAA1211LQ6NV74 962 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MBOAT1Q6ZNC8 495 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 ADIPOR2Q86V24 386 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 C2orf73Q8N5S3 287 aaPredicted RBP6.92□□□□□ -1.3
CTNND1-216ENST00000527467 OR4K1Q8NGD4 311 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 OR56B4Q8NH76 319 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 SPPL2BQ8TCT7 592 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 GNPDA2Q8TDQ7 276 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 C16orf78Q8WTQ4 265 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 NPRL2Q8WTW4 380 aa6.92□□□□□ -1.3
CTNND1-216ENST00000527467 MR1Q95460 341 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms