RNA–Protein interactions for RNA: ENST00000526734.5

VPS28-206, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS28, Length 570 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-206ENST00000526734 DDCP20711 480 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 DNASE1L1P49184 302 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 BTKQ06187 659 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 CEBPEQ15744 281 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 SCIMPQ6UWF3 145 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 TMEM251Q8N6I4 163 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 OR10G3Q8NGC4 313 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 GATA5Q9BWX5 397 aaPredicted RBP18.98■□□□□ 0.63
VPS28-206ENST00000526734 STMN4Q9H169 189 aaPredicted RBP18.98■□□□□ 0.63
VPS28-206ENST00000526734 C12orf65Q9H3J6 166 aaKnown RBP18.98■□□□□ 0.63
VPS28-206ENST00000526734 ZFP64Q9NPA5 681 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 MYNNQ9NPC7 610 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 SLC35C2Q9NQQ7 365 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 TUBA8Q9NY65 449 aaPredicted RBP18.98■□□□□ 0.63
VPS28-206ENST00000526734 B4GALT7Q9UBV7 327 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 BCAP29Q9UHQ4 241 aa18.98■□□□□ 0.63
VPS28-206ENST00000526734 CNOT11Q9UKZ1 510 aaKnown RBP18.98■□□□□ 0.63
VPS28-206ENST00000526734 A0A1B0GVC2 190 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 CYSRT1A8MQ03 144 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 ESPNB1AK53 854 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 BCKDKO14874 412 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 AZIN1O14977 448 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 RGS14O43566 566 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 SUSD5O60279 629 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 NPHS1O60500 1241 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 SNX4O95219 450 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 TPOP07202 933 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 MPIP34949 423 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 SERPINB5P36952 375 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 PIGAP37287 484 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 ERCC6LQ2NKX8 1250 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 FAM219BQ5XKK7 198 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 FAM111BQ6SJ93 734 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 FAM9CQ8IZT9 166 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 ZNF597Q96LX8 424 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 FAM111AQ96PZ2 611 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 DOHHQ9BU89 302 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 EBPLQ9BY08 206 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 DEFB127Q9H1M4 99 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 TP63Q9H3D4 680 aaPredicted RBP18.97■□□□□ 0.63
VPS28-206ENST00000526734 EML4Q9HC35 981 aaKnown RBP18.97■□□□□ 0.63
VPS28-206ENST00000526734 MIEF1Q9NQG6 463 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 TAS2R7Q9NYW3 318 aa18.97■□□□□ 0.63
VPS28-206ENST00000526734 MAST4O15021 2626 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 HCN1O60741 890 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 CBX7O95931 251 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 DCTP40126 519 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 PPICP45877 212 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 ADORA2A-AS1P86434 159 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 SLC10A1Q14973 349 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 ZNF628Q5EBL2 1059 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 PRAMEF20Q5VT98 475 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 TMEM211Q6ICI0 200 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 TMEM81Q6P7N7 255 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 CD163Q86VB7 1156 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 OR52R1Q8NGF1 315 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 PUM2Q8TB72 1066 aaKnown RBP eCLIP18.96■□□□□ 0.63
VPS28-206ENST00000526734 SPPL2AQ8TCT8 520 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 DIO2Q92813 273 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 EXOSC8Q96B26 276 aaKnown RBP18.96■□□□□ 0.63
VPS28-206ENST00000526734 LCORQ96JN0 433 aaPredicted RBP18.96■□□□□ 0.63
VPS28-206ENST00000526734 PHF12Q96QT6 1004 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 DMRTA2Q96SC8 542 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 NXF5Q9H1B4 397 aaKnown RBP18.96■□□□□ 0.63
VPS28-206ENST00000526734 ZNF703Q9H7S9 590 aaPredicted RBP18.96■□□□□ 0.63
VPS28-206ENST00000526734 C1orf109Q9NX04 203 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 CROCCQ5TZA2 2017 aa18.96■□□□□ 0.63
VPS28-206ENST00000526734 PRSS44E7EML9 344 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 AQP7O14520 342 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 TO15178 435 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 FGF4P08620 206 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 PCSK2P16519 638 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 DRD5P21918 477 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 ABCD3P28288 659 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 ALDH3A1P30838 453 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 MAGEA5P43359 124 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 DUSP2Q05923 314 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 C2orf80Q0P641 193 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 EXOSC7Q15024 291 aaKnown RBP18.95■□□□□ 0.62
VPS28-206ENST00000526734 LTB4RQ15722 352 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 TRMT12Q53H54 448 aaKnown RBP18.95■□□□□ 0.62
VPS28-206ENST00000526734 TMEM198Q66K66 360 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 HIST2H2BCQ6DN03 193 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 FAM71E1Q6IPT2 247 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 NOXRED1Q6NXP6 359 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 TRILQ7L0X0 811 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 CCDC116Q8IYX3 515 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 ADCY4Q8NFM4 1077 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 TCP10LQ8TDR4 215 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 ZNF764Q96H86 408 aaPredicted RBP18.95■□□□□ 0.62
VPS28-206ENST00000526734 BBS4Q96RK4 519 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 ITPAQ9BY32 194 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 PARD6BQ9BYG5 372 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 TNFRSF12AQ9NP84 129 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 CHST11Q9NPF2 352 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.95■□□□□ 0.62
VPS28-206ENST00000526734 RAB21Q9UL25 225 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 CCL27Q9Y4X3 112 aa18.95■□□□□ 0.62
VPS28-206ENST00000526734 V9GYY5 206 aaPredicted RBP18.95■□□□□ 0.62
VPS28-206ENST00000526734 UNC79Q9P2D8 2635 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms