RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 C9orf47Q6ZRZ4 202 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 CMC1Q7Z7K0 106 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 EXOC3L1Q86VI1 746 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 GKN2Q86XP6 184 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 CPNE9Q8IYJ1 553 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SAMD14Q8IZD0 417 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 DPP10Q8N608 796 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SIDT2Q8NBJ9 832 aaKnown RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 SUMF1Q8NBK3 374 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 LSM14AQ8ND56 463 aaKnown RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 CCL4L1Q8NHW4 92 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 HM13Q8TCT9 377 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ACMSDQ8TDX5 336 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 LMX1AQ8TE12 382 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 EEF1AKMT1Q8WVE0 214 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 N4BP2L2Q92802 583 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 PDXPQ96GD0 296 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 PDLIM5Q96HC4 596 aaKnown RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 TSNARE1Q96NA8 513 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 FOPNLQ96NB1 174 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 FRG2BQ96QU4 278 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 OR2M4Q96R27 311 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SMC6Q96SB8 1091 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 TIMM29Q9BSF4 260 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 GSDMCQ9BYG8 508 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 DPEP2Q9H4A9 486 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 OSGEPL1Q9H4B0 414 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 GAREM1Q9H706 876 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 COG4Q9H9E3 785 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 NMRAL1Q9HBL8 299 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SIRT3Q9NTG7 399 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 ZNF446Q9NWS9 450 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 DCAF16Q9NXF7 216 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 EURLQ9NYK6 297 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SENP1Q9P0U3 644 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 SPASTQ9UBP0 616 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 CTNNAL1Q9UBT7 734 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 APOBEC3BQ9UH17 382 aaKnown RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 GMEB2Q9UKD1 530 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 GRID1Q9ULK0 1009 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 PSMD13Q9UNM6 376 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 KCNK6Q9Y257 313 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 PCYT1BQ9Y5K3 369 aaPredicted RBP4.26□□□□□ -1.73
USP48-211ENST00000526044 SPAG17Q6Q759 2223 aa4.26□□□□□ -1.73
USP48-211ENST00000526044 ZFC3H1O60293 1989 aaKnown RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 PI4KAP42356 2102 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 LRP4O75096 1905 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 A0A1B0GTQ1 180 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 OR5K4A6NMS3 321 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 PDZK1P1A8MUH7 402 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 COPEO14579 308 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 YKT6O15498 198 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 AQP9O43315 295 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 KCNAB3O43448 404 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SPAG7O75391 227 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 GSTA1P08263 222 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 RBP1P09455 135 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 HIST1H2AGP0C0S8 130 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC35G4P0C7Q5 338 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ZNF806P0C7X5 589 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC35E2BP0CK96 405 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ENO3P13929 434 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC2A4P14672 509 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 CD1DP15813 335 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 XRCC1P18887 633 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 HIST1H2ADP20671 130 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 AK4P27144 223 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 ACADLP28330 430 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 PDHA2P29803 388 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 TNFSF8P32971 234 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 NBL1P41271 181 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ACTR1BP42025 376 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 RASSF2P50749 326 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 MVDP53602 400 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 CASP6P55212 293 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ACTR1AP61163 376 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ATP6V0D1P61421 351 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 BNC1Q01954 994 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC18A2Q05940 514 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 DMPKQ09013 629 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 GRIK2Q13002 908 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SCARB2Q14108 478 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ERV3-1Q14264 604 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 KRT33BQ14525 404 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SHBQ15464 509 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 ZKSCAN8Q15776 578 aaPredicted RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 CCDC6Q16204 474 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 RPE65Q16518 533 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 TSTQ16762 297 aaKnown RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 FAM83EQ2M2I3 478 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 GLIPR1L2Q4G1C9 344 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 TNFAIP8L3Q5GJ75 292 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 AGBL2Q5U5Z8 902 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 KCTD16Q68DU8 428 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 CAPRIN2Q6IMN6 1127 aaKnown RBP4.25□□□□□ -1.73
USP48-211ENST00000526044 LRRC8EQ6NSJ5 796 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 SLC30A6Q6NXT4 461 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 KLC3Q6P597 504 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 TTC23LQ6PF05 361 aa4.25□□□□□ -1.73
USP48-211ENST00000526044 IYDQ6PHW0 289 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms