RNA–Protein interactions for RNA: ENST00000525441.5

NR1H3-228, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 610 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-228ENST00000525441 IKBIPQ70UQ0 350 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 CROCCP2Q86T23 111 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 CCDC116Q8IYX3 515 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 FAM109AQ8N4B1 249 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 OR10G3Q8NGC4 313 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 OR52N2Q8NGI0 321 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 CTHRC1Q96CG8 243 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 BBS4Q96RK4 519 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 DEFB127Q9H1M4 99 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 MYNNQ9NPC7 610 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 MIEF1Q9NQG6 463 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 C1orf109Q9NX04 203 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 BOKQ9UMX3 212 aaPredicted RBP16.14■□□□□ 0.17
NR1H3-228ENST00000525441 FIS1Q9Y3D6 152 aa16.14■□□□□ 0.17
NR1H3-228ENST00000525441 POLR3HQ9Y535 204 aaPredicted RBP16.14■□□□□ 0.17
NR1H3-228ENST00000525441 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.14■□□□□ 0.17
NR1H3-228ENST00000525441 A0A1B0GTH9 108 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 CLDN1O95832 211 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 FGF4P08620 206 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 PCSK2P16519 638 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 PIGAP37287 484 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 DUSP2Q05923 314 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 EXOSC7Q15024 291 aaKnown RBP16.13■□□□□ 0.17
NR1H3-228ENST00000525441 LTB4RQ15722 352 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 HYAL4Q2M3T9 481 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 ARL13AQ5H913 290 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-228ENST00000525441 KANK2Q63ZY3 851 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 FAM71E1Q6IPT2 247 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 FAM180BQ6P0A1 224 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 FAM9CQ8IZT9 166 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 CLYBLQ8N0X4 340 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 OR52R1Q8NGF1 315 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 OR5M3Q8NGP4 307 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 CCDC120Q96HB5 630 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 SECISBP2Q96T21 854 aaKnown RBP16.13■□□□□ 0.17
NR1H3-228ENST00000525441 MECRQ9BV79 373 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 ZDHHC11Q9H8X9 412 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 LRTM1Q9HBL6 345 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 PLSCR2Q9NRY7 297 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 TUBA8Q9NY65 449 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-228ENST00000525441 CCL27Q9Y4X3 112 aa16.13■□□□□ 0.17
NR1H3-228ENST00000525441 CHCHD2Q9Y6H1 151 aaPredicted RBP16.13■□□□□ 0.17
NR1H3-228ENST00000525441 GTF3C1Q12789 2109 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 ANKRD33BA6NCL7 494 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 ACOX3O15254 700 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 TYROBPO43914 113 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 ERLIN1O75477 346 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 CBX7O95931 251 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 NAGAP17050 411 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 NTSP30990 170 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 SMSP52788 366 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 MRPS35P82673 323 aaKnown RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 FOXO1Q12778 655 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 CEBPEQ15744 281 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 TRMT12Q53H54 448 aaKnown RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 ZNF628Q5EBL2 1059 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 PRAMEF20Q5VT98 475 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 TMEM64Q6YI46 380 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 TICAM1Q8IUC6 712 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 CHERPQ8IWX8 916 aaKnown RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 ZNF808Q8N4W9 903 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 TMEM251Q8N6I4 163 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 OR9A2Q8NGT5 310 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 FAM57AQ8TBR7 257 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 DIO2Q92813 273 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 HSPBAP1Q96EW2 488 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 LCORQ96JN0 433 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 DOHHQ9BU89 302 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 ITPAQ9BY32 194 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 STMN4Q9H169 189 aaPredicted RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 NXF5Q9H1B4 397 aaKnown RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 ZFP64Q9NPA5 681 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 TAS2R7Q9NYW3 318 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 B4GALT7Q9UBV7 327 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 CNOT11Q9UKZ1 510 aaKnown RBP16.12■□□□□ 0.17
NR1H3-228ENST00000525441 MEMO1Q9Y316 297 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 TRAF6Q9Y4K3 522 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 CROCCQ5TZA2 2017 aa16.12■□□□□ 0.17
NR1H3-228ENST00000525441 UQCRHLA0A096LP55 91 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 PDE9AO76083 593 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 SLITRK5O94991 958 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 TPOP07202 933 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 CHRNGP07510 517 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 BPGMP07738 259 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 CREB1P16220 341 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 DRD5P21918 477 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 ABCD3P28288 659 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 PPICP45877 212 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 FBXW4P57775 412 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 SLC10A1Q14973 349 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 CEP85LQ5SZL2 805 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 FGD2Q7Z6J4 655 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 MRGPRGQ86SM5 289 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 DOLPP1Q86YN1 238 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 DDIASQ8IXT1 998 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 PPP1R14CQ8TAE6 165 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.11■□□□□ 0.17
NR1H3-228ENST00000525441 SPPL2AQ8TCT8 520 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 TWIST2Q8WVJ9 160 aa16.11■□□□□ 0.17
NR1H3-228ENST00000525441 ITLN2Q8WWU7 325 aaPredicted RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms