RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 XAB2Q9HCS7 855 aaKnown RBP2.81□□□□□ -1.96
CSDE1-208ENST00000524652 FBXO6Q9NRD1 293 aaPredicted RBP2.81□□□□□ -1.96
CSDE1-208ENST00000524652 FAM114A2Q9NRY5 505 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 IARS2Q9NSE4 1012 aaKnown RBP2.81□□□□□ -1.96
CSDE1-208ENST00000524652 SPATS2LQ9NUQ6 558 aaKnown RBP2.81□□□□□ -1.96
CSDE1-208ENST00000524652 HAUS2Q9NVX0 235 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 SMOXQ9NWM0 555 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 ANKRD10Q9NXR5 420 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 OR6C3Q9NZP0 311 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 BFARQ9NZS9 450 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 HACD3Q9P035 362 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 NLKQ9UBE8 527 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 CTNNAL1Q9UBT7 734 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 IKZF3Q9UKT9 509 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 SUFUQ9UMX1 484 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 MAD1L1Q9Y6D9 718 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 RPS6KL1Q9Y6S9 549 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 FAM169AQ9Y6X4 670 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 U3KQA8 63 aa2.81□□□□□ -1.96
CSDE1-208ENST00000524652 RP1L1Q8IWN7 2480 aaPredicted RBP2.81□□□□□ -1.96
CSDE1-208ENST00000524652 COL12A1Q99715 3063 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CEP295Q9C0D2 2601 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SDK2Q58EX2 2172 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 NUP210LQ5VU65 1888 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 A0A1B0GTQ1 180 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 A6NCN8 305 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 FAM159BA6NKW6 160 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 OR2AG2A6NM03 316 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 WNT9BO14905 357 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 VILLO15195 856 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 EIF3HO15372 352 aaKnown RBP eCLIP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 XPNPEP2O43895 674 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 NIPSNAP2O75323 286 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SLC25A14O95258 325 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 WISP3O95389 354 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 ACSL3O95573 720 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CSF2P04141 144 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SHBGP04278 402 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 POLBP06746 335 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 IVLP07476 585 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 RETP07949 1114 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 HOXC4P09017 264 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 TPBGLP0DKB5 382 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 OGNP20774 298 aaKnown RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 EPHA8P29322 1005 aaPredicted RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PDHA2P29803 388 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SSTR2P30874 369 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 AKT2P31751 481 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CCR7P32248 378 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 TTKP33981 857 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 HSD17B3P37058 310 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 HADHAP40939 763 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 GNPDA1P46926 289 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 RABIFP47224 123 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 LEPRP48357 1165 aaKnown RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PRLHRP49683 370 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CDKN2DP55273 166 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SRP54P61011 504 aaKnown RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PRAMEP78395 509 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SARNPP82979 210 aaKnown RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CAV1Q03135 178 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CACNG1Q06432 222 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CALCOCO2Q13137 446 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CUL1Q13616 776 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 ITGA9Q13797 1035 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 FRG1Q14331 258 aaKnown RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 NFE2L1Q14494 772 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 DUOXA1Q1HG43 343 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 HLA-BQ31612 363 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 KBTBD12Q3ZCT8 623 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 FASTKD1Q53R41 847 aaKnown RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 HSP90AA5PQ58FG0 334 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SPANXN3Q5MJ09 141 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 WDR45BQ5MNZ6 344 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 LDLRAP1Q5SW96 308 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 LCE1FQ5T754 118 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 FAM219BQ5XKK7 198 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PDPK2PQ6A1A2 396 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 ZNF470Q6ECI4 717 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CCDC70Q6NSX1 233 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 NEPROQ6NW34 567 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 DUS1LQ6P1R4 473 aaKnown RBP2.8□□□□□ -1.96
CSDE1-208ENST00000524652 TMEM220Q6QAJ8 160 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 AFTPHQ6ULP2 937 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 ENPP7Q6UWV6 458 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PACS1Q6VY07 963 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 MACC1Q6ZN28 852 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 C3orf62Q6ZUJ4 267 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 PARGQ86W56 976 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 CEP97Q8IW35 865 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 IFT20Q8IY31 132 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 NDUFAF2Q8N183 169 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SLC25A45Q8N413 288 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 MINDY1Q8N5J2 469 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 BBOF1Q8ND07 529 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 MYRIPQ8NFW9 859 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 OR56A4Q8NGH8 313 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SVIPQ8NHG7 77 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 GSDMBQ8TAX9 411 aa2.8□□□□□ -1.96
CSDE1-208ENST00000524652 SAP25Q8TEE9 199 aa2.8□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms