RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 DEFB126Q9BYW3 111 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 LIN28AQ9H9Z2 209 aaKnown RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ARNT2Q9HBZ2 717 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 MRPS30Q9NP92 439 aaKnown RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 C6orf203Q9P0P8 240 aaPredicted RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 MTRF1LQ9UGC7 380 aaKnown RBP6.07□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF148Q9UQR1 794 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 FREM3P0C091 2139 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 DOCK7Q96N67 2140 aa6.07□□□□□ -1.44
SDCBP-210ENST00000522843 TRRAPQ9Y4A5 3859 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 IGKV3D-11A0A0A0MRZ8 115 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TRBV11-1A0A0K0K1C0 115 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 FCHO1O14526 889 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 DNALI1O14645 258 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 EIF3HO15372 352 aaKnown RBP eCLIP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ANXA9O76027 345 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 EPPINO95925 133 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 RFPL3SP0C7P2 107 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 GABRA1P14867 456 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 EZRP15311 586 aaKnown RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 PAX1P15863 534 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 LOXP28300 417 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 RBL1P28749 1068 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 RPL22P35268 128 aaKnown RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 GPR143P51810 404 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 BTG2P78543 158 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 CDK16Q00536 496 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 RELAQ04206 551 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 PRDX1Q06830 199 aaKnown RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SNX1Q13596 522 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 CASP8Q14790 479 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SLMAPQ14BN4 828 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 MORF4L2Q15014 288 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 PPP1R7Q15435 360 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 NDUFA9Q16795 377 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF750Q32MQ0 723 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ACSF3Q4G176 576 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 WLSQ5T9L3 541 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 NDUFAF5Q5TEU4 345 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ARMC3Q5W041 872 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ICE2Q659A1 982 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 RGS9BPQ6ZS82 235 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 CYS1Q717R9 158 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF534Q76KX8 674 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SLC22A16Q86VW1 577 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 CDKL3Q8IVW4 592 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TMEM156Q8N614 296 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 PPFIBP2Q8ND30 876 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 MCUQ8NE86 351 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 OR13J1Q8NGT2 312 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ZCCHC10Q8TBK6 192 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ASZ1Q8WWH4 475 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 IFT81Q8WYA0 676 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 RERGQ96A58 199 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SARAFQ96BY9 339 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SNF8Q96H20 258 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SECISBP2Q96T21 854 aaKnown RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TBL1YQ9BQ87 522 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TMEM109Q9BVC6 243 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 PLA2G12AQ9BZM1 189 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 IL1RL2Q9HB29 575 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 NECTIN3Q9NQS3 549 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 YAE1D1Q9NRH1 226 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 PIH1D1Q9NWS0 290 aaKnown RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TUBA8Q9NY65 449 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SPATA7Q9P0W8 599 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 PAK5Q9P286 719 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 ZNF629Q9UEG4 869 aaPredicted RBP6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TAC3Q9UHF0 121 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TRHDEQ9UKU6 1024 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 NFU1Q9UMS0 254 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 SNX24Q9Y343 169 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 NAALAD2Q9Y3Q0 740 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 WIF1Q9Y5W5 379 aa6.06□□□□□ -1.44
SDCBP-210ENST00000522843 TRGV5A0A0B4J1U4 118 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 A8MUA0 341 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 E7ESA3 106 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 MYO1CO00159 1063 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 TXNDC9O14530 226 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 SPRY1O43609 319 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 CD5LO43866 347 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 HCN1O60741 890 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 FHP07954 510 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 FAM157CP0CG43 387 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 PKMP14618 531 aaKnown RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 MAOAP21397 527 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 CNR1P21554 472 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 TIMP3P35625 211 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 SOX3P41225 446 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 DNASE1L1P49184 302 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 PLTPP55058 493 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 OLR1P78380 273 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 MRPS25P82663 173 aaKnown RBP6.05□□□□□ -1.44
SDCBP-210ENST00000522843 CALCOCO2Q13137 446 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 POU6F1Q14863 301 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 NAA25Q14CX7 972 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 PARP6Q2NL67 630 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 CHRFAM7AQ494W8 412 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 FAM153CQ494X1 144 aa6.05□□□□□ -1.44
SDCBP-210ENST00000522843 CCDC38Q502W7 563 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms