RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 GPR141Q7Z602 305 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 TSPYL5Q86VY4 417 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 MCATQ8IVS2 390 aaKnown RBP17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 VANGL1Q8TAA9 524 aaPredicted RBP17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 MS4A4EQ96PG1 132 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 RHCGQ9UBD6 479 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 LIPT1Q9Y234 373 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 POFUT2Q9Y2G5 429 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 HCN4Q9Y3Q4 1203 aa17.34■□□□□ 0.37
TRAPPC9-210ENST00000521667 LMO7DNF2Z398 122 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 SLC1A7O00341 560 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 KIF1CO43896 1103 aaKnown RBP17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 FUT4P22083 530 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 RPP38P78345 283 aaKnown RBP17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 DEFB133Q30KQ1 61 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 UBALD2Q8IYN6 164 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 TAGAPQ8N103 731 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR2L13Q8N349 312 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 SDR16C5Q8N3Y7 309 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 OR4D11Q8NGI4 311 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 CNIH3Q8TBE1 160 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 ZNF566Q969W8 418 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 NMD3Q96D46 503 aaKnown RBP17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 ALPK1Q96QP1 1244 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 MAP3K3Q99759 626 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 POLR1BQ9H9Y6 1135 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 PTGFRNQ9P2B2 879 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 COMMD3-BMI1R4GMX3 469 aa17.33■□□□□ 0.37
TRAPPC9-210ENST00000521667 ARRDC5A6NEK1 342 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 K7ESF4 209 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 CCDC159P0C7I6 412 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 CSNK1EP49674 416 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 ZBED5Q49AG3 693 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 ATAD3BQ5T9A4 648 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 MFSD12Q6NUT3 480 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 DEF8Q6ZN54 512 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 ARHGEF39Q8N4T4 335 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 DNAJC22Q8N4W6 341 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 TMEM52Q8NDY8 209 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 OR9Q2Q8NGE9 314 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 ADAMTS15Q8TE58 950 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 TCTN2Q96GX1 697 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 TRNT1Q96Q11 434 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 NIPSNAP1Q9BPW8 284 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 ZNF556Q9HAH1 456 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 ANKHQ9HCJ1 492 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 GIN1Q9NXP7 522 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 CALML5Q9NZT1 146 aa17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 GOLGA4Q13439 2230 aaKnown RBP17.33■□□□□ 0.36
TRAPPC9-210ENST00000521667 DUXAA6NLW8 204 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 SGK494L7N484 410 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 FGF17O60258 216 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 SRPX2O60687 465 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 ABCB7O75027 752 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 SEMA7AO75326 666 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 ANGPTL1O95841 491 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 CTSBP07858 339 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 ID2Q02363 134 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 ZNF628Q5EBL2 1059 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 CDC73Q6P1J9 531 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 OGFOD3Q6PK18 319 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 FAM92BQ6ZTR7 304 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 RBM45Q8IUH3 476 aaKnown RBP17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 SHISA5Q8N114 240 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 DNASE2BQ8WZ79 361 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 TANKQ92844 425 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 HRASLS5Q96KN8 279 aa17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 NMNAT1Q9HAN9 279 aaPredicted RBP17.32■□□□□ 0.36
TRAPPC9-210ENST00000521667 SDC3O75056 442 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 LDB3O75112 727 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 GPR75O95800 540 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 AGR2O95994 175 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 ATP1B1P05026 303 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 RAB38P57729 211 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 NUP107P57740 925 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 PMS2P3Q13401 168 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 PRTGQ2VWP7 1150 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 FAM214AQ32MH5 1076 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 C16orf62Q7Z3J2 963 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 COMTD1Q86VU5 262 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 LACC1Q8IV20 430 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 BPIFB6Q8NFQ5 453 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 SLC35A4Q96G79 324 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 DHRS1Q96LJ7 313 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 WFDC6Q9BQY6 131 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 SLC38A1Q9H2H9 487 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 RSL24D1Q9UHA3 163 aaKnown RBP17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 ACAD8Q9UKU7 415 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 CLCA2Q9UQC9 943 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 SLC9A8Q9Y2E8 581 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 SIT1Q9Y3P8 196 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 DSPPQ9NZW4 1301 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 FAM227AF5H4B4 570 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 M0R3H8 397 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 CASC3O15234 703 aaKnown RBP17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 NME6O75414 186 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 RDH16O75452 317 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 CPNE6O95741 557 aa17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 PDGFBP01127 241 aaPredicted RBP17.31■□□□□ 0.36
TRAPPC9-210ENST00000521667 CBLP22681 906 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms