RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-213	ENST00000519553	TRBV2	A0A0J9YWF9	115 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553		A0A0U1RQG5	324 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	RHBDL1	O75783	438 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	SYNGR4	O95473	234 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	GOT2	P00505	430 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	APRT	P07741	180 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	KRTAP1-4	P0C5Y4	121 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	COPB2	P35606	906 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	SRP54	P61011	504 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	UBXN1	Q04323	297 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	PPP1R8	Q12972	351 aa	Known RBP	4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	LUZP1	Q86V48	1076 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	TMEM185A	Q8NFB2	350 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	COPS7A	Q9UBW8	275 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	FAM153A	Q9UHL3	310 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	ENTPD4	Q9Y227	616 aa		4.56	□□□□□ -1.68
PTPN12-213	ENST00000519553	ADAMTS9	Q9P2N4	1935 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	KRTAP9-6	A8MVA2	160 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	TSC22D2	O75157	780 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	IGKV3-15	P01624	115 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	GIG44	P09565	113 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	NPY2R	P49146	381 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	ARHGDIA	P52565	204 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	VCP	P55072	806 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	YBEY	P58557	167 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	ZNF85	Q03923	595 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	AP1B1	Q10567	949 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	CD226	Q15762	336 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	CNPY1	Q3B7I2	92 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	UTF1	Q5T230	341 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	KRTAP5-1	Q6L8H4	278 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	APOOL	Q6UXV4	268 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	C1orf186	Q6ZWK4	172 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	ZNF584	Q8IVC4	421 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	FAM9B	Q8IZU0	186 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	COLGALT1	Q8NBJ5	622 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	TMEM45B	Q96B21	275 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	PIWIL1	Q96J94	861 aa	Known RBP	4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	FAM173A	Q9BQD7	235 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	NLN	Q9BYT8	704 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	ZNF175	Q9Y473	711 aa		4.55	□□□□□ -1.68
PTPN12-213	ENST00000519553	TMEM89	A2RUT3	159 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	UMPS	P11172	480 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	SAA4	P35542	130 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	SLC7A2	P52569	658 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	HAND2	P61296	217 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	ZNF33B	Q06732	778 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	ZKSCAN8	Q15776	578 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	PPP1R3A	Q16821	1122 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	RNF212	Q495C1	297 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	CMPK2	Q5EBM0	449 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	HERC4	Q5GLZ8	1057 aa	Predicted RBP	4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	ATRAID	Q6UW56	229 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	PAMR1	Q6UXH9	720 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	STOX1	Q6ZVD7	989 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	PRSS48	Q7RTY5	328 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	ADAMTSL2	Q86TH1	951 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	OR52E1	Q8NGJ3	308 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	EXOC6	Q8TAG9	804 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	URGCP	Q8TCY9	931 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	DEFB118	Q96PH6	123 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	TNMD	Q9H2S6	317 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	HPS4	Q9NQG7	708 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	TNFRSF19	Q9NS68	423 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	CENPM	Q9NSP4	180 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	LHX3	Q9UBR4	397 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	MIOX	Q9UGB7	285 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	SYNJ2	O15056	1496 aa		4.54	□□□□□ -1.68
PTPN12-213	ENST00000519553	ZMYM6	O95789	1325 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553		A0A0U1RRA0	63 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	NUDT14	O95848	222 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	SNRPC	P09234	159 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	WNT2	P09544	360 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	HLA-DPA1	P20036	260 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	FAS	P25445	335 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	PPIA	P62937	165 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	CBX3	Q13185	183 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	PPP2R5C	Q13362	524 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	ETFRF1	Q6IPR1	90 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	CGB2	Q6NT52	195 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	MFSD7	Q6UXD7	560 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	YRDC	Q86U90	279 aa	Known RBP	4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	PYROXD2	Q8N2H3	581 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	TMEM37	Q8WXS4	190 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	ATP6V0A1	Q93050	837 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	SIRPD	Q9H106	197 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	ABCD2	Q9UBJ2	740 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	RSPH14	Q9UHP6	348 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	VSIG4	Q9Y279	399 aa		4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	RPH3A	Q9Y2J0	694 aa	Predicted RBP	4.53	□□□□□ -1.68
PTPN12-213	ENST00000519553	TRABD2B	A6NFA1	517 aa		4.52	□□□□□ -1.69
PTPN12-213	ENST00000519553	PDE5A	O76074	875 aa		4.52	□□□□□ -1.69
PTPN12-213	ENST00000519553	IGFBP5	P24593	272 aa		4.52	□□□□□ -1.69
PTPN12-213	ENST00000519553	NT5C2	P49902	561 aa		4.52	□□□□□ -1.69
PTPN12-213	ENST00000519553	SST	P61278	116 aa		4.52	□□□□□ -1.69
PTPN12-213	ENST00000519553	MS4A13	Q5J8X5	152 aa		4.52	□□□□□ -1.69
PTPN12-213	ENST00000519553	RABEPK	Q7Z6M1	372 aa		4.52	□□□□□ -1.69
PTPN12-213	ENST00000519553	PPP1R16A	Q96I34	528 aa		4.52	□□□□□ -1.69

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