RNA–Protein interactions for RNA: ENST00000518344.1

FAM49B-208, Transcript of family with sequence similarity 49 member B, humanhuman

TSL 3

Gene FAM49B, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49B-208ENST00000518344 ITM2AO43736 263 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 CBX7O95931 251 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 STSP08842 583 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 RNF224P0DH78 156 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 GPX3P22352 226 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 SOX18P35713 384 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 PIGAP37287 484 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 DNASE1L1P49184 302 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 PPIAP62937 165 aaKnown RBP17.21■□□□□ 0.35
FAM49B-208ENST00000518344 HSF1Q00613 529 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 DUSP8Q13202 625 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 IKBIPQ70UQ0 350 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 FJX1Q86VR8 437 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 DND1Q8IYX4 353 aaKnown RBP17.21■□□□□ 0.35
FAM49B-208ENST00000518344 PRR22Q8IZ63 422 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 GHDCQ8N2G8 530 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 ANKRD42Q8N9B4 389 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 OR10G3Q8NGC4 313 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 CTHRC1Q96CG8 243 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 FAM173AQ9BQD7 235 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 ZNF395Q9H8N7 513 aaPredicted RBP17.21■□□□□ 0.35
FAM49B-208ENST00000518344 ANKRA2Q9H9E1 313 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 PRODH2Q9UF12 536 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 BAIAP2L1Q9UHR4 511 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 EXO1Q9UQ84 846 aaKnown RBP17.21■□□□□ 0.35
FAM49B-208ENST00000518344 NPFFR2Q9Y5X5 522 aa17.21■□□□□ 0.35
FAM49B-208ENST00000518344 A0A1B0GUH1 482 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 FAM166BA8MTA8 275 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 MYO1GB0I1T2 1018 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 AKAP10O43572 662 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 CDC40O60508 579 aaKnown RBP eCLIP17.2■□□□□ 0.34
FAM49B-208ENST00000518344 SLC19A2O60779 497 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 PEX11AO75192 247 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 SKAP2O75563 359 aaPredicted RBP17.2■□□□□ 0.34
FAM49B-208ENST00000518344 LRATO95237 230 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 SERPINE1P05121 402 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 JUNP05412 331 aaKnown RBP17.2■□□□□ 0.34
FAM49B-208ENST00000518344 BGNP21810 368 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 NCBP2P52298 156 aaKnown RBP eCLIP17.2■□□□□ 0.34
FAM49B-208ENST00000518344 ABCE1P61221 599 aaKnown RBP17.2■□□□□ 0.34
FAM49B-208ENST00000518344 CEBPEQ15744 281 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 NNATQ16517 81 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 PRAMEF20Q5VT98 475 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 HHATQ5VTY9 493 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 CES4AQ5XG92 561 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 GK5Q6ZS86 529 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 FAM9CQ8IZT9 166 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 CLHC1Q8NHS4 586 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 ZNF675Q8TD23 568 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 PAQR8Q8TEZ7 354 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 MAGED4Q96JG8 741 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 TSSK3Q96PN8 268 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 ITPAQ9BY32 194 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 TTTY12Q9BZ98 90 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 NXF5Q9H1B4 397 aaKnown RBP17.2■□□□□ 0.34
FAM49B-208ENST00000518344 DEFB127Q9H1M4 99 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 RYDENQ9NUL5 291 aaKnown RBP17.2■□□□□ 0.34
FAM49B-208ENST00000518344 GIMAP2Q9UG22 337 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 TMED5Q9Y3A6 229 aa17.2■□□□□ 0.34
FAM49B-208ENST00000518344 ATP6AP2A0A1C7CYW4 349 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 TMEM114B3SHH9 223 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 ACOT7O00154 380 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 TP53I11O14683 189 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 NME6O75414 186 aaPredicted RBP17.19■□□□□ 0.34
FAM49B-208ENST00000518344 ATP6AP2O75787 350 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 BCAS2O75934 225 aaPredicted RBP17.19■□□□□ 0.34
FAM49B-208ENST00000518344 PDE9AO76083 593 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 LDLRP01130 860 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 DHRS4L1P0CG22 281 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 SDC1P18827 310 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 NTSP30990 170 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 EMDP50402 254 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 CASP6P55212 293 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 FBXW4P57775 412 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 KCNJ2P63252 427 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 ESPL1Q14674 2120 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 NTRK2Q16620 822 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 BNC2Q6ZN30 1099 aaPredicted RBP17.19■□□□□ 0.34
FAM49B-208ENST00000518344 SPPL2CQ8IUH8 684 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 C17orf47Q8NEP4 570 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 OR52N2Q8NGI0 321 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 LCORQ96JN0 433 aaPredicted RBP17.19■□□□□ 0.34
FAM49B-208ENST00000518344 FCRL1Q96LA6 429 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 PPP3R2Q96LZ3 170 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 C3orf30Q96M34 536 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 PSMG3-AS1Q96PY0 264 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 CCT7Q99832 543 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 SH2D2AQ9NP31 389 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 TUBA8Q9NY65 449 aaPredicted RBP17.19■□□□□ 0.34
FAM49B-208ENST00000518344 TAS2R7Q9NYW3 318 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 CNIH4Q9P003 139 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.19■□□□□ 0.34
FAM49B-208ENST00000518344 FLNCQ14315 2725 aa17.19■□□□□ 0.34
FAM49B-208ENST00000518344 ABOP16442 354 aa17.18■□□□□ 0.34
FAM49B-208ENST00000518344 ABCD3P28288 659 aa17.18■□□□□ 0.34
FAM49B-208ENST00000518344 SLC1A6P48664 564 aa17.18■□□□□ 0.34
FAM49B-208ENST00000518344 TMED10P49755 219 aaKnown RBP17.18■□□□□ 0.34
FAM49B-208ENST00000518344 PER3P56645 1201 aa17.18■□□□□ 0.34
FAM49B-208ENST00000518344 DCAF7P61962 342 aa17.18■□□□□ 0.34
FAM49B-208ENST00000518344 STX3Q13277 289 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms