RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 MAP4K2Q12851 820 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 GPR176Q14439 515 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 ARHGEF6Q15052 776 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 PXDC1Q5TGL8 231 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 KIF18BQ86Y91 864 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 FBXL6Q8N531 539 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 OR11H4Q8NGC9 324 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 LRRC20Q8TCA0 184 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 OTUB1Q96FW1 271 aaPredicted RBP11.69□□□□□ -0.54
PCM1-203ENST00000517545 TMEM169Q96HH4 297 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 TEFMQ96QE5 360 aaKnown RBP11.69□□□□□ -0.54
PCM1-203ENST00000517545 TRAF4Q9BUZ4 470 aaPredicted RBP11.69□□□□□ -0.54
PCM1-203ENST00000517545 PCDH10Q9P2E7 1040 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 MGAT4AQ9UM21 535 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 TMEM129A0AVI4 362 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 SGK494L7N484 410 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 TEX28O15482 410 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 RFPL3O75679 317 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 PDGFAP04085 211 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 SRPRAP08240 638 aaKnown RBP11.69□□□□□ -0.54
PCM1-203ENST00000517545 ACP2P11117 423 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 ELK1P19419 428 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 CELP19835 753 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 KCNJ5P48544 419 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 RAB8AP61006 207 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 HSPB3Q12988 150 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 CD200R1LQ6Q8B3 271 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 TEX261Q6UWH6 196 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 IL20RBQ6UXL0 311 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 LSMEM1Q8N8F7 131 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 PLA2G15Q8NCC3 412 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 DNAJA4Q8WW22 397 aaPredicted RBP11.69□□□□□ -0.54
PCM1-203ENST00000517545 ZNF354BQ96LW1 612 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 ARHGAP9Q9BRR9 750 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 EVA1BQ9NVM1 165 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 SEC14L3Q9UDX4 400 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
PCM1-203ENST00000517545 CLCA2Q9UQC9 943 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 U3KQ87 197 aa11.69□□□□□ -0.54
PCM1-203ENST00000517545 TRAV6A0A075B6T7 132 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 RTCAO00442 366 aaKnown RBP11.68□□□□□ -0.54
PCM1-203ENST00000517545 ZNF197O14709 1029 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 MTNR1AP48039 350 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 SLC6A11P48066 632 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 SNRPD1P62314 119 aaKnown RBP11.68□□□□□ -0.54
PCM1-203ENST00000517545 POU4F3Q15319 338 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 SLC8B1Q6J4K2 584 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 NR2C2APQ86WQ0 139 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 ARIH2OSQ8N7S6 290 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 RASGEF1AQ8N9B8 481 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 ZNF680Q8NEM1 530 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 OR4F15Q8NGB8 312 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 ZNF431Q8TF32 576 aaPredicted RBP11.68□□□□□ -0.54
PCM1-203ENST00000517545 MRPS31Q92665 395 aaKnown RBP11.68□□□□□ -0.54
PCM1-203ENST00000517545 GPR137Q96N19 417 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 ZFP64Q9NPA5 681 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 MAN2C1Q9NTJ4 1040 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 NCKAP1Q9Y2A7 1128 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 TRDV1A0A1B0GX56 115 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 PRAMEF27A3QJZ7 478 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 I3L521 148 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 HMGN4O00479 90 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 GABRPO00591 440 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 SYPP08247 313 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 NNMTP40261 264 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 CDK5Q00535 292 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 SYPL1Q16563 259 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 CLEC12AQ5QGZ9 265 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 Q6ZNB5 142 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 ZNF485Q8NCK3 441 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 OR11H7Q8NGC8 314 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 RAET1EQ8TD07 263 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 CREB3L1Q96BA8 519 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 PRR14Q9BWN1 585 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 A4GALTQ9NPC4 353 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 UCKL1Q9NWZ5 548 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 EXTL2Q9UBQ6 330 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 ACAD8Q9UKU7 415 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 PPIL1Q9Y3C6 166 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 PDE4DIPQ5VU43 2346 aa11.68□□□□□ -0.54
PCM1-203ENST00000517545 CASP8AP2Q9UKL3 1982 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 PRODHO43272 600 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 HRO43593 1189 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 SLC6A1P30531 599 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 RAB40BQ12829 278 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 ZNF791Q3KP31 576 aaPredicted RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 METAP1DQ6UB28 335 aaPredicted RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 C2orf73Q8N5S3 287 aaPredicted RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 SOCS4Q8WXH5 440 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 UCN3Q969E3 161 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 NEURL3Q96EH8 262 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 RIOK2Q9BVS4 552 aaKnown RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 FGF20Q9NP95 211 aaPredicted RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 ZNF222Q9UK12 451 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 PLXND1Q9Y4D7 1925 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 FOXE1O00358 373 aaPredicted RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 SLC28A2O43868 658 aa11.67□□□□□ -0.54
PCM1-203ENST00000517545 ZNF157P51786 506 aaPredicted RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 MANFP55145 182 aaKnown RBP11.67□□□□□ -0.54
PCM1-203ENST00000517545 SLC25A30Q5SVS4 291 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms