RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 ATP13A2Q9NQ11 1180 aa9.47□□□□□ -0.89
NEDD9-214ENST00000513989 DDX18Q9NVP1 670 aaKnown RBP9.47□□□□□ -0.89
NEDD9-214ENST00000513989 P4HTMQ9NXG6 502 aa9.47□□□□□ -0.89
NEDD9-214ENST00000513989 NDE1Q9NXR1 346 aa9.47□□□□□ -0.89
NEDD9-214ENST00000513989 BCAP29Q9UHQ4 241 aa9.47□□□□□ -0.89
NEDD9-214ENST00000513989 MRPS18BQ9Y676 258 aaKnown RBP9.47□□□□□ -0.89
NEDD9-214ENST00000513989 USP9YO00507 2555 aaPredicted RBP9.47□□□□□ -0.89
NEDD9-214ENST00000513989 SNRNP200O75643 2136 aaKnown RBP9.46□□□□□ -0.89
NEDD9-214ENST00000513989 A0A096LPI6 279 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 IGHV3-20A0A0C4DH32 117 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 A0A1W2PQ72 361 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SAGE2PA6NJ88 616 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 TTC36A6NLP5 189 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 OR6C76A6NM76 312 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 EVPLLA8MZ36 301 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 TGFBR3LH3BV60 316 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SOCS6O14544 535 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 NKX2-8O15522 239 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PRAMEF2O60811 474 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SCN2BO60939 215 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ZFAND5O76080 213 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SEC24DO94855 1032 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 KRT16P08779 473 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ZCCHC18P0CG32 403 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 EFNA1P20827 205 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 CALB2P22676 271 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ANXA11P50995 505 aaKnown RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 CLCN2P51788 898 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PRKAG1P54619 331 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 FOXL2P58012 376 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 HBA1P69905 142 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PHC1P78364 1004 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 TXNL4AP83876 142 aaKnown RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 GABPB1Q06547 395 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 FUT7Q11130 342 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 AIMP2Q13155 320 aaKnown RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 NFYCQ13952 458 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 TLR1Q15399 786 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ZNHIT3Q15649 155 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PRSS53Q2L4Q9 553 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 MPEG1Q2M385 716 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 BTBD16Q32M84 506 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ZNF628Q5EBL2 1059 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 FAM69BQ5VUD6 431 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 HLA-DQA1Q5Y7H0 255 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PLAG1Q6DJT9 500 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ZCCHC12Q6PEW1 402 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 TMEM107Q6UX40 140 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 TMEM64Q6YI46 380 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 HSDL2Q6YN16 418 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SLC29A4Q7RTT9 530 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SZRD1Q7Z422 152 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PPP1R32Q7Z5V6 425 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 MRGPREQ86SM8 312 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ANKRD46Q86W74 232 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 KBTBD2Q8IY47 623 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 CLECL1Q8IZS7 167 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 DPP10Q8N608 796 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 TMEM102Q8N9M5 508 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 OR11G2Q8NGC1 345 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PSMA8Q8TAA3 256 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SUN3Q8TAQ9 357 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SLC2A12Q8TD20 617 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 SFXN5Q8TD22 340 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 NUDT8Q8WV74 236 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 GTF2H4Q92759 462 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 KAT2AQ92830 837 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 ROPN1LQ96C74 230 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 CTHRC1Q96CG8 243 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 VMP1Q96GC9 406 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 HOPXQ9BPY8 73 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 RAD21L1Q9H4I0 556 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 RYDENQ9NUL5 291 aaKnown RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 FBXL4Q9UKA2 621 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 FAF1Q9UNN5 650 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 C19orf53Q9UNZ5 99 aaPredicted RBP9.46□□□□□ -0.9
NEDD9-214ENST00000513989 CORO2BQ9UQ03 480 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 POLHQ9Y253 713 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 MAN2B2Q9Y2E5 1009 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 AP3M1Q9Y2T2 418 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 PCDHGB3Q9Y5G1 929 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 CLDN16Q9Y5I7 305 aa9.46□□□□□ -0.9
NEDD9-214ENST00000513989 MDC1Q14676 2089 aaKnown RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 DUXAA6NLW8 204 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 MRASO14807 208 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 AIM2O14862 343 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 PRKAR1AP10644 381 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 COX6A1P12074 109 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 CAPN3P20807 821 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 SOAT1P35610 550 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 MC3RP41968 323 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 MAGEA8P43361 318 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 ZFP36L2P47974 494 aaKnown RBP9.45□□□□□ -0.9
NEDD9-214ENST00000513989 PRIM2P49643 509 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 RASSF2P50749 326 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 SLC26A5P58743 744 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 DCAF7P61962 342 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 PSPHP78330 225 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 MXRA7P84157 204 aa9.45□□□□□ -0.9
NEDD9-214ENST00000513989 MGAT2Q10469 447 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms