RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 C19orf84I3L1E1 186 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 PLOD2O00469 737 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CLDN4O14493 209 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CLIC2O15247 247 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 ATP6V0E1O15342 81 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 PRKRAO75569 313 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 NOL4O94818 638 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 HSPA4LO95757 839 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 AMBPP02760 352 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 RPLP0P05388 317 aaKnown RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 PATE4P0C8F1 98 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CFC1BP0CG36 223 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CFC1P0CG37 223 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 PRSS56P0CW18 603 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SAGP10523 405 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 HAPLN1P10915 354 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CD22P20273 847 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CA4P22748 312 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SFNP31947 248 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CEACAM8P31997 349 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 HSPA4P34932 840 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 NUDT1P36639 197 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CSNK1G2P78368 415 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SLC7A9P82251 487 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 TSPY1Q01534 308 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 MXD4Q14582 209 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 ZNF235Q14590 738 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 KIAA1644Q3SXP7 199 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 UGT3A2Q3SY77 523 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 ELFN2Q5R3F8 820 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 C11orf63Q6NUN7 778 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 XKRXQ6PP77 449 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 ARHGAP22Q7Z5H3 698 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 VSIG1Q86XK7 387 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 PLA2G4DQ86XP0 818 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 ZNF383Q8NA42 475 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 THAP8Q8NA92 274 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SGMS2Q8NHU3 365 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 GANCQ8TET4 914 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 LRRC15Q8TF66 581 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 PIBF1Q8WXW3 757 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 EXT2Q93063 718 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 TMEM143Q96AN5 459 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 MOB3AQ96BX8 217 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 ZMYND19Q96E35 227 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 NSL1Q96IY1 281 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 RAB3IPQ96QF0 476 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 F2RL3Q96RI0 385 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 EGFL8Q99944 293 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 DDA1Q9BW61 102 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 ILKAPQ9H0C8 392 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CXCL16Q9H2A7 254 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SIX2Q9NPC8 291 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SLC52A3Q9NQ40 469 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 PFDN4Q9NQP4 134 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SH3GLB2Q9NR46 395 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SDR39U1Q9NRG7 319 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SPHK1Q9NYA1 384 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 FLRT3Q9NZU0 649 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 TBC1D7Q9P0N9 293 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 THAP10Q9P2Z0 257 aaPredicted RBP3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 DAPK2Q9UIK4 370 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 SCML1Q9UN30 329 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 C2CD2Q9Y426 696 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 CPQQ9Y646 472 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 WNK1Q9H4A3 2382 aa3.14□□□□□ -1.91
TOPBP1-208ENST00000511439 POLEQ07864 2286 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 MGAM2Q2M2H8 2515 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 IGHV4-61A0A0C4DH41 118 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 SMIM28A0A1B0GU29 152 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 BICDL2A1A5D9 508 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 NEDD8-MDP1E9PL57 170 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CASC3O15234 703 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CHMP2AO43633 222 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CYTH3O43739 400 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 NEBLO76041 1014 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 STBD1O95210 358 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 PENKP01210 267 aaPredicted RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 IGHV4-59P01825 116 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CSN3P07498 182 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CD48P09326 243 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 PLA2G4BP0C869 781 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 FDPSP14324 419 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 IFNAR1P17181 557 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 TYMPP19971 482 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 JAK1P23458 1154 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 IL4RP24394 825 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CALRP27797 417 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 MNDAP41218 407 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 KRTAP10-12P60413 245 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 RPS14P62263 151 aaKnown RBP3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 MYL7Q01449 175 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 ZNF415Q09FC8 603 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CUL3Q13618 768 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 TAF13Q15543 124 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 DCAF4L1Q3SXM0 396 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 MCMDC2Q4G0Z9 681 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 CCDC184Q52MB2 194 aa3.13□□□□□ -1.91
TOPBP1-208ENST00000511439 C6orf136Q5SQH8 315 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms