RNA–Protein interactions for RNA: ENST00000509912.5

NEK1-204, Transcript of NIMA related kinase 1, humanhuman

TSL 2

Gene NEK1, Length 2,971 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-204ENST00000509912 TARM1B6A8C7 271 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 BUB1O43683 1085 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 TNFSF15O95150 251 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 MMP2P08253 660 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 RORAP35398 523 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 SNAPC1Q16533 368 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 DEFB133Q30KQ1 61 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 FAM98BQ52LJ0 330 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 ZNF542PQ5EBM4 170 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 MARC1Q5VT66 337 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 DENND2CQ68D51 928 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 AADACL2Q6P093 401 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 KDELC1Q6UW63 502 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 CERS6Q6ZMG9 384 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 NUP54Q7Z3B4 507 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 GPALPP1Q8IXQ4 340 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 GALNT16Q8N428 558 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 RRNAD1Q96FB5 475 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 GRAMD2BQ96HH9 432 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 EGLN2Q96KS0 407 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 QKIQ96PU8 341 aaKnown RBP eCLIP4.65□□□□□ -1.67
NEK1-204ENST00000509912 FERMT1Q9BQL6 677 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 SNRNP25Q9BV90 132 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 PPIL3Q9H2H8 161 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 SYNDIG1Q9H7V2 258 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 APOBEC3BQ9UH17 382 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 ZNF148Q9UQR1 794 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 CARD8Q9Y2G2 431 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 TSC22D4Q9Y3Q8 395 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 DSPP15924 2871 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 ZZEF1O43149 2961 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 SPEGQ15772 3267 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 A0A1B0GVG6 124 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 A0A1W2PNU3 283 aaPredicted RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 H3BMH7 237 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 STMND1H3BQB6 276 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 K7ERQ8 282 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 RAD51BO15315 384 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 SMAD6O43541 496 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 DUX1O43812 170 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 ANXA9O76027 345 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 FAM58BPP0C7Q3 252 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 CBSLP0DN79 551 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 TCF4P15884 667 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 ACADLP28330 430 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 MIPP30301 263 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 CBSP35520 551 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 MMP13P45452 471 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 THOP1P52888 689 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 ARPC4P59998 168 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 OLIG2Q13516 323 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 DPYSL3Q14195 570 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 ARHGAP19Q14CB8 494 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 TAF1AQ15573 450 aaPredicted RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 ANKRD20A8PQ5CZ79 823 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 ARL6IP6Q8N6S5 226 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 OR10G6Q8NH81 332 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 SGCDQ92629 289 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 MIB2Q96AX9 1013 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 SPATA13Q96N96 652 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 PKP4Q99569 1192 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 CCDC3Q9BQI4 270 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 KCNN2Q9H2S1 579 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 ZDHHC6Q9H6R6 413 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 WDR26Q9H7D7 661 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 EPB41L5Q9HCM4 733 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 FANCFQ9NPI8 374 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 TRIM10Q9UDY6 481 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 NXT1Q9UKK6 140 aaKnown RBP4.65□□□□□ -1.67
NEK1-204ENST00000509912 KLHL20Q9Y2M5 609 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 AP1M2Q9Y6Q5 423 aa4.65□□□□□ -1.67
NEK1-204ENST00000509912 IGLV3-12A0A075B6K2 115 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 OGG1O15527 345 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 ATP8B1O43520 1251 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 GRAP2O75791 330 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 PAHP00439 452 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 KDELR1P24390 212 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 GEMP55040 296 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 ILF3Q12906 894 aaKnown RBP eCLIP4.64□□□□□ -1.67
NEK1-204ENST00000509912 KLF10Q13118 480 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 PPP6R3Q5H9R7 873 aaPredicted RBP4.64□□□□□ -1.67
NEK1-204ENST00000509912 PRAMEF17Q5VTA0 474 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 FNDC7Q5VTL7 733 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 NCBP2-AS2Q69YL0 99 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 THOC7Q6I9Y2 204 aaKnown RBP4.64□□□□□ -1.67
NEK1-204ENST00000509912 METTL2BQ6P1Q9 378 aaKnown RBP4.64□□□□□ -1.67
NEK1-204ENST00000509912 LINGO4Q6UY18 593 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 ZBTB49Q6ZSB9 765 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 CYS1Q717R9 158 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 BTN2A1Q7KYR7 527 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 RASGEF1CQ8N431 466 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 CCDC185Q8N715 623 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 GBP7Q8N8V2 638 aaPredicted RBP4.64□□□□□ -1.67
NEK1-204ENST00000509912 MCUQ8NE86 351 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 OR8H1Q8NGG4 311 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 JOSD2Q8TAC2 188 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 IGFBPL1Q8WX77 278 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 HAUS1Q96CS2 278 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 SLCO5A1Q9H2Y9 848 aa4.64□□□□□ -1.67
NEK1-204ENST00000509912 HHATLQ9HCP6 504 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms