RNA–Protein interactions for RNA: ENST00000509900.5

PTPN20-223, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 693 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-223ENST00000509900 CUL1Q13616 776 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 PARP6Q2NL67 630 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 CTU2Q2VPK5 515 aaKnown RBP8.52□□□□□ -1.05
PTPN20-223ENST00000509900 CYHR1Q6ZMK1 362 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 FAM214BQ7L5A3 538 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 CDKL3Q8IVW4 592 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-223ENST00000509900 MPP5Q8N3R9 675 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 DOK4Q8TEW6 326 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 CTNNBL1Q8WYA6 563 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-223ENST00000509900 LPGAT1Q92604 370 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 S100PBPQ96BU1 408 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 RHBDF1Q96CC6 855 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 OR4K3Q96R72 315 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 HEMGNQ9BXL5 484 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 WWTR1Q9GZV5 400 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 PLSCR4Q9NRQ2 329 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 ARL15Q9NXU5 204 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 ING1Q9UK53 422 aaPredicted RBP8.52□□□□□ -1.05
PTPN20-223ENST00000509900 PCDHB10Q9UN67 800 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 BZW2Q9Y6E2 419 aaKnown RBP8.52□□□□□ -1.05
PTPN20-223ENST00000509900 TENM3Q9P273 2699 aa8.52□□□□□ -1.05
PTPN20-223ENST00000509900 H7C417 338 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 MPC1LP0DKB6 136 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 ZNF23P17027 643 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 PSMB1P20618 241 aaKnown RBP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 SAT1P21673 171 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 HNRNPH1P31943 449 aaKnown RBP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 RPL22P35268 128 aaKnown RBP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 LIMS1P48059 325 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 EFNA4P52798 201 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 CDH11P55287 796 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 LIM2P55344 173 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 EIF3EP60228 445 aaKnown RBP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 SERTAD2Q14140 314 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 DOC2AQ14183 400 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 EFTUD2Q15029 972 aaKnown RBP eCLIP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 EBPQ15125 230 aaKnown RBP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 TAB1Q15750 504 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 TRIM40Q6P9F5 258 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 DARS2Q6PI48 645 aaKnown RBP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 USP43Q70EL4 1123 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 UBE2R2Q712K3 238 aaPredicted RBP8.51□□□□□ -1.05
PTPN20-223ENST00000509900 TBC1D19Q8N5T2 526 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 TRPV3Q8NET8 790 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 FNDC9Q8TBE3 224 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 SLC35G2Q8TBE7 412 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 GAL3ST3Q96A11 431 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 FBXL20Q96IG2 436 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 FAR2Q96K12 515 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 HAUS8Q9BT25 410 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 KCNF1Q9H3M0 494 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 CBLN4Q9NTU7 201 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 DNAJC11Q9NVH1 559 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 MED29Q9NX70 200 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 DAPP1Q9UN19 280 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 CRYL1Q9Y2S2 319 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 GPR52Q9Y2T5 361 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 TCAF1Q9Y4C2 921 aa8.51□□□□□ -1.05
PTPN20-223ENST00000509900 H0YC42 278 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 H3BMM5 538 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 SMAD9O15198 467 aaKnown RBP8.5□□□□□ -1.05
PTPN20-223ENST00000509900 ERI3O43414 337 aaKnown RBP8.5□□□□□ -1.05
PTPN20-223ENST00000509900 B3GALT2O43825 422 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 ESR1P03372 595 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 SERPING1P05155 500 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 CCND1P24385 295 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 CERS1P27544 350 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 TTKP33981 857 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 PTGDSP41222 190 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 GRIA1P42261 906 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 MARCKSL1P49006 195 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 TPD52P55327 224 aaPredicted RBP8.5□□□□□ -1.05
PTPN20-223ENST00000509900 REEP5Q00765 189 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 IRF9Q00978 393 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 KIF5AQ12840 1032 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 CDH17Q12864 832 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 TSC22D1Q15714 1073 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 AAGABQ6PD74 315 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 CHMP1BQ7LBR1 199 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 SLC29A4Q7RTT9 530 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 PIWIL4Q7Z3Z4 852 aaKnown RBP8.5□□□□□ -1.05
PTPN20-223ENST00000509900 LINC00523Q86TU6 105 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 UBQLNLQ8IYU4 475 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 TAGAPQ8N103 731 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 ZNF619Q8N2I2 560 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 WDSUB1Q8N9V3 476 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 PIWIL2Q8TC59 973 aaKnown RBP8.5□□□□□ -1.05
PTPN20-223ENST00000509900 PEX13Q92968 403 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 MS4A6EQ96DS6 147 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 SNF8Q96H20 258 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 SFXN2Q96NB2 322 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 FOXN4Q96NZ1 517 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 PIMREGQ9BSJ6 248 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 PINK1Q9BXM7 581 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 ACTR8Q9H981 624 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 GALNT9Q9HCQ5 603 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 NGBQ9NPG2 151 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 SYBUQ9NX95 663 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 TAS2R10Q9NYW0 307 aa8.5□□□□□ -1.05
PTPN20-223ENST00000509900 ADAMTS6Q9UKP5 1117 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms