RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 PSMA8Q8TAA3 256 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 C12orf43Q96C57 262 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 TM4SF19Q96DZ7 209 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 CDX2Q99626 313 aaPredicted RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 THSD1Q9NS62 852 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 UCKL1Q9NWZ5 548 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 LYARQ9NX58 379 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 HCN3Q9P1Z3 774 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 PCDHGA6Q9Y5G7 932 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 LRP4O75096 1905 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 TRIM64A6NGJ6 449 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 EMC8O43402 210 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 FAM20BO75063 409 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 DNAJB5O75953 348 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 INMTO95050 263 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 HOXB6P17509 224 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 BCKDHBP21953 392 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 GSTM2P28161 218 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 ALDH4A1P30038 563 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 KRT20P35900 424 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 GFERP55789 205 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 MAT1AQ00266 395 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 ZBED5Q49AG3 693 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 RBM48Q5RL73 367 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 MLIPQ5VWP3 458 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 XAF1Q6GPH4 301 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 TSSK4Q6SA08 328 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 KLHL17Q6TDP4 642 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 C16orf62Q7Z3J2 963 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 ENTHD1Q8IYW4 607 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 OR4K14Q8NGD5 310 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 OR6T1Q8NGN1 323 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 NT5CQ8TCD5 201 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 CDS1Q92903 461 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 APOL4Q9BPW4 351 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 TUBA8Q9NY65 449 aaPredicted RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 NDRG4Q9ULP0 352 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 TNFSF14O43557 240 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 ABCB7O75027 752 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 ZNF217O75362 1048 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 SERPINB7O75635 380 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 FADS2O95864 444 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 FOSL2P15408 326 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 NT5EP21589 574 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 AVPR1BP47901 424 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 KCNJ5P48544 419 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 BLKP51451 505 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 KCNC4Q03721 635 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 EXOSC7Q15024 291 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 MLC1Q15049 377 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 SYT16Q17RD7 645 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 ZC3H14Q6PJT7 736 aaKnown RBP13.98□□□□□ -0.17
PHF3-209ENST00000509330 GALNT15Q8N3T1 639 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 ARL14Q8N4G2 192 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 NRBF2Q96F24 287 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 NODALQ96S42 347 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 SERINC2Q96SA4 455 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 ZNF556Q9HAH1 456 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 C11orf16Q9NQ32 467 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 SELENONQ9NZV5 590 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 NTNG1Q9Y2I2 539 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 SNX5Q9Y5X3 404 aa13.98□□□□□ -0.17
PHF3-209ENST00000509330 A0A0A6YYC8 382 aaPredicted RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 NPIPA5A0A0B4J1W7 369 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 NPIPA7E9PJI5 369 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 I3L1I5 382 aaPredicted RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 UBXN7O94888 489 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 EPPINO95925 133 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 NPIPA8P0DM63 369 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 RHCEP18577 417 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 GSTM5P46439 218 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 PDX1P52945 283 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 MAD2L1BPQ15013 274 aaPredicted RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 ZC3H12BQ5HYM0 836 aaKnown RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 CACTIN-AS1Q8N1I8 211 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 SETD9Q8NE22 299 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 ADAMTS15Q8TE58 950 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 ZNF354BQ96LW1 612 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 TGM7Q96PF1 710 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 SLC38A3Q99624 504 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 C3orf14Q9HBI5 128 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 DNAAF2Q9NVR5 837 aaKnown RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 RNF6Q9Y252 685 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 GPR55Q9Y2T6 319 aaPredicted RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 URADA6NGE7 173 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 AHCYL1O43865 530 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 ATE1O95260 518 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 TLX1P31314 330 aaPredicted RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 DMWDQ09019 674 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 KRT73Q86Y46 540 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 OR56A1Q8NGH5 318 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 APOBEC4Q8WW27 367 aaKnown RBP13.97□□□□□ -0.17
PHF3-209ENST00000509330 BLOC1S6Q9UL45 172 aa13.97□□□□□ -0.17
PHF3-209ENST00000509330 CACNA1IQ9P0X4 2223 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 METTL12A8MUP2 240 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 TRMUO75648 421 aaKnown RBP13.96□□□□□ -0.17
PHF3-209ENST00000509330 PDE9AO76083 593 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 RYKP34925 604 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 KEAP1Q14145 624 aa13.96□□□□□ -0.17
PHF3-209ENST00000509330 NPTX1Q15818 432 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms