RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 DCAF12L2Q5VW00 463 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HACD4Q5VWC8 232 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HIST2H2AA3Q6FI13 130 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TRPM8Q7Z2W7 1104 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ADHFE1Q8IWW8 467 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 IFT20Q8IY31 132 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 LRRC57Q8N9N7 239 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 M1APQ8TC57 530 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HIST1H2ACQ93077 130 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PNKPQ96T60 521 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TMEM138Q9NPI0 162 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 FAM206AQ9NX38 181 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 DNMT3LQ9UJW3 386 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF229Q9UJW7 825 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 WIF1Q9Y5W5 379 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 M0R3G1 203 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 FLRT2O43155 660 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 DUX1O43812 170 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 GATBO75879 557 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PRSS23O95084 383 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SBK3P0C264 359 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CTSAP10619 480 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SELLP14151 372 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ITGB5P18084 799 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 GCAP28676 217 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RGS6P49758 472 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ARHGDIBP52566 201 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 METAP1P53582 386 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CDH11P55287 796 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SIM1P81133 766 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 DGUOKQ16854 277 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PRAMEF19Q5SWL8 479 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SAMD5Q5TGI4 173 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 NOTUMQ6P988 496 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 METTL7BQ6UX53 244 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CFAP77Q6ZQR2 320 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 XYLT1Q86Y38 959 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CHDHQ8NE62 594 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TESCQ96BS2 214 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 DUX5Q96PT3 197 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 FOXB1Q99853 325 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SLC22A4Q9H015 551 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SMYD3Q9H7B4 428 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SFXN1Q9H9B4 322 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 NCANO14594 1321 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CIB4A0PJX0 185 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SLC15A5A6NIM6 579 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 OR6C75A6NL08 312 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 H7C0C1 242 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PCDH17O14917 1159 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 GASTP01350 101 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 LEPRP48357 1165 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RARRES1P49788 294 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 EFNA5P52803 228 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 IL10RBQ08334 325 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 BST1Q10588 318 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 BAATQ14032 418 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 KPNB1Q14974 876 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CELF3Q5SZQ8 465 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 TREML2Q5T2D2 321 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RGMBQ6NW40 437 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 DPY19L2P1Q6NXN4 242 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 MRPL14Q6P1L8 145 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 CYB5D1Q6P9G0 228 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RNF111Q6ZNA4 994 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RASSF6Q6ZTQ3 369 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PRSS42Q7Z5A4 293 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ZNF808Q8N4W9 903 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 PLA2G15Q8NCC3 412 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 SLC4A5Q9BY07 1137 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 RANBP3Q9H6Z4 567 aaPredicted RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 ISG20L2Q9H9L3 353 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 LMAN1LQ9HAT1 526 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 HESX1Q9UBX0 185 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 LSM4Q9Y4Z0 139 aaKnown RBP3.71□□□□□ -1.82
NEDD4-209ENST00000508871 V9GYY9 64 aa3.71□□□□□ -1.82
NEDD4-209ENST00000508871 MAGEB17A8MXT2 336 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 VCYO14598 125 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PPM1DO15297 605 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 COCHO43405 550 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 OR10H3O60404 316 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SPAG6O75602 509 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 DFFBO76075 338 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CHRNA1P02708 482 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 LCATP04180 440 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CCDC166P0CW27 439 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PCSK1P29120 753 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 ARL2P36404 184 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 INHBEP58166 350 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 FCHO2Q0JRZ9 810 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 LCN1P1Q5VSP4 162 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 BBS12Q6ZW61 710 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SLC16A14Q7RTX9 510 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SYVN1Q86TM6 617 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 CCNYL1Q8N7R7 359 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 PNPLA1Q8N8W4 532 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 OR1N1Q8NGS0 311 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 OR13F1Q8NGS4 319 aa3.7□□□□□ -1.82
NEDD4-209ENST00000508871 SLC7A13Q8TCU3 470 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms