RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 CCDC137Q6PK04 289 aaKnown RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 ZC3HC1Q86WB0 502 aaKnown RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 IGDCC3Q8IVU1 814 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 TRIM42Q8IWZ5 723 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 LAS2Q8IYD9 372 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 ZCCHC7Q8N3Z6 543 aaKnown RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 DOK4Q8TEW6 326 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 ANKRD49Q8WVL7 239 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 UBE2E3Q969T4 207 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 CMTM7Q96FZ5 175 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 HS3ST6Q96QI5 342 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 OR2B2Q9GZK3 357 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 DERL2Q9GZP9 239 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 POPDC3Q9HBV1 291 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 EXO1Q9UQ84 846 aaKnown RBP8.52□□□□□ -1.05
NEDD9-211ENST00000508546 DLGAP4Q9Y2H0 992 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 PKD1L1Q8TDX9 2849 aa8.52□□□□□ -1.05
NEDD9-211ENST00000508546 FAM95CA0A1B0GW59 222 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 LRRC14BA6NHZ5 514 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 PLOD2O00469 737 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 PLPP1O14494 284 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SPRY1O43609 319 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 PRKRAO75569 313 aaKnown RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 URI1O94763 535 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ABCB1P08183 1280 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SLC35E2BP0CK96 405 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SLC35E2P0CK97 266 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ABCD3P28288 659 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SSTR4P31391 388 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 CCKARP32238 428 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 UGT2B10P36537 528 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 LHX2P50458 406 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 GFRA1P56159 465 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SRYQ05066 204 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SNTA1Q13424 505 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 TNK1Q13470 666 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 FRG1Q14331 258 aaKnown RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 STEAP4Q687X5 459 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 MRM1Q6IN84 353 aaKnown RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 MED27Q6P2C8 311 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF474Q6S9Z5 364 aaPredicted RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 PLXDC2Q6UX71 529 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ANGPTL8Q6UXH0 198 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 HIPK1Q86Z02 1210 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 GRAMD2AQ8IUY3 354 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF615Q8N8J6 731 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SNX31Q8N9S9 440 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 PDPRQ8NCN5 879 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 OR7G3Q8NG95 312 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 GRK7Q8WTQ7 553 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 TMEM171Q8WVE6 324 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 CAVIN3Q969G5 261 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ESAMQ96AP7 390 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 RGMAQ96B86 450 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 STARD4Q96DR4 205 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 FAM111AQ96PZ2 611 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 C19orf24Q9BVV8 132 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 SORBS1Q9BX66 1292 aaKnown RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 OR51B5Q9H339 312 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 CXorf56Q9H5V9 222 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 METTL7AQ9H8H3 244 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ACTR8Q9H981 624 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 L2HGDHQ9H9P8 463 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 CXorf21Q9HAI6 301 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 ELOVL5Q9NYP7 299 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 PTBP2Q9UKA9 531 aaKnown RBP8.51□□□□□ -1.05
NEDD9-211ENST00000508546 RNF112Q9ULX5 631 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 WIF1Q9Y5W5 379 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 PSAT1Q9Y617 370 aa8.51□□□□□ -1.05
NEDD9-211ENST00000508546 C16orf97H3BN30 126 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 SAP18O00422 153 aaKnown RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 DNALI1O14645 258 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 TLX2O43763 284 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 ICOSLGO75144 302 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 SH3BGRLO75368 114 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 PPM1BO75688 479 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 CBR3O75828 277 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 SMNDC1O75940 238 aaKnown RBP eCLIP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 WISP3O95389 354 aaPredicted RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 TGM6O95932 706 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 POU2F1P14859 743 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 ZNF708P17019 499 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 KRT15P19012 456 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 PTGDSP41222 190 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 RAP1GDS1P52306 607 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 ATP5J2P56134 94 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 CLDN18P56856 261 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 RPS13P62277 151 aaKnown RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 ILF2Q12905 390 aaKnown RBP8.5□□□□□ -1.05
NEDD9-211ENST00000508546 FBXO48Q5FWF7 155 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 OR2A2Q6IF42 318 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 VWA1Q6PCB0 445 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 AAGABQ6PD74 315 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 LRRC70Q7Z2Q7 622 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 NUP54Q7Z3B4 507 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 IFNEQ86WN2 208 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 GPSM1Q86YR5 675 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 PRR22Q8IZ63 422 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 OR14L1PQ8NHC6 308 aa8.5□□□□□ -1.05
NEDD9-211ENST00000508546 LRRC39Q96DD0 335 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms