RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 FUNDC1Q8IVP5 155 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNF34Q8IZ26 560 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 ADGRG5Q8IZF4 528 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 DTX3Q8N9I9 347 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 OR10J5Q8NHC4 309 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 NUBPLQ8TB37 319 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 SMPDL3AQ92484 453 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 SMPDL3BQ92485 455 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 SUSD6Q92537 303 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNF333Q96JL9 665 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 CSPG4P5Q96PW8 444 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 UBL7Q96S82 380 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 LMF2Q9BU23 707 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 WDR54Q9H977 334 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 SCUBE2Q9NQ36 999 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 MRPL17Q9NRX2 175 aaKnown RBP7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 ARMC1Q9NVT9 282 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 STMN3Q9NZ72 180 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 ERVW-1Q9UQF0 538 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 FADS3Q9Y5Q0 445 aa7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 TSSC4Q9Y5U2 329 aaPredicted RBP7.02□□□□□ -1.29
PDGFRA-206ENST00000508170 E9PQ18 207 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 RNASEK-C17orf49H0YIS7 233 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 I6L893 689 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 EMC8O43402 210 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HIST1H2ABP04908 130 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 GP1BAP07359 652 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HOXB5P09067 269 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HIST1H2ADP20671 130 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 FBLN1P23142 703 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 PSMB5P28074 263 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 NDUFS1P28331 727 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 STAT6P42226 847 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 MAGEA2P43356 314 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 TNFRSF4P43489 277 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 OR3A1P47881 315 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 PSMD4P55036 377 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 ERVS71-1P61550 626 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 PITPNAQ00169 270 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 DSC1Q08554 894 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 ACKR1Q16570 336 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HIST2H2ACQ16777 129 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 NDUFAF6Q330K2 333 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 C1orf146Q5VVC0 180 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 Q6ZNB5 142 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 KNDC1Q76NI1 1749 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HIST3H2AQ7L7L0 130 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 MRPL21Q7Z2W9 205 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 TBC1D26Q86UD7 250 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 SERPINA9Q86WD7 417 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 CYP4Z2PQ8N1L4 340 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 WDR20Q8TBZ3 569 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HM13Q8TCT9 377 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 NUDCD2Q8WVJ2 157 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 NELFBQ8WX92 580 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 PSMG3-AS1Q96PY0 264 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 KLHDC3Q9BQ90 382 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 TMPRSS13Q9BYE2 586 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 DCLRE1BQ9H816 532 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 MCCC2Q9HCC0 563 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 UFSP2Q9NUQ7 469 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 NRXN3Q9Y4C0 1643 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 CDK12Q9NYV4 1490 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 YY2O15391 372 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 STX7O15400 261 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 HSPA12AO43301 675 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 ZSCAN12O43309 604 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 TSPAN2O60636 221 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 DEXIO95424 95 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 DANCRP0C864 163 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 PPP2R1BP30154 601 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 SLC8A1P32418 973 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 RGRP47804 291 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 NAAAQ02083 359 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 EFNB3Q15768 340 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 RBBP7Q16576 425 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 SOWAHAQ2M3V2 549 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 AGKQ53H12 422 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 LIPKQ5VXJ0 399 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 LIPJQ5W064 366 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 GRHL2Q6ISB3 625 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 H3F3CQ6NXT2 135 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNF530Q6P9A1 599 aaPredicted RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 RHBDF2Q6PJF5 856 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 DPPA4Q7L190 304 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 PRSS45Q7RTY3 260 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 ZNF605Q86T29 641 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 IGFN1Q86VF2 1251 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 CBWD2Q8IUF1 395 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 TMEFF1Q8IYR6 380 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 GPC2Q8N158 579 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 BOLLQ8N9W6 283 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 IGDCC4Q8TDY8 1250 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 UBASH3BQ8TF42 649 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 U2AF1L4Q8WU68 220 aaKnown RBP7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 GLYATL1Q969I3 302 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 ZG16BQ96DA0 208 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 CCDC120Q96HB5 630 aa7.01□□□□□ -1.29
PDGFRA-206ENST00000508170 KLHL32Q96NJ5 620 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms