RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZNF248Q8NDW4 579 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 NUP43Q8NFH3 380 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 OR52R1Q8NGF1 315 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 DNAJB8Q8NHS0 232 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 DAZLQ92904 295 aaKnown RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 ROPN1LQ96C74 230 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 SLC7A6OSQ96CW6 309 aaPredicted RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 GIMAP5Q96F15 307 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 SENP5Q96HI0 755 aaPredicted RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 FBXL20Q96IG2 436 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 LPAR4Q99677 370 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 CPPED1Q9BRF8 314 aaPredicted RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 GPATCH1Q9BRR8 931 aaKnown RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 EFHD1Q9BUP0 239 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 NUDT9Q9BW91 350 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 OR8D2Q9GZM6 311 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 IKZF5Q9H5V7 419 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 CCDC86Q9H6F5 360 aaKnown RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 TPT1P8Q9HAU6 139 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 DDX18Q9NVP1 670 aaKnown RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 GPATCH2Q9NW75 528 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 GID8Q9NWU2 228 aa13.21□□□□□ -0.29
RNF4-208ENST00000507247 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 ZNF223Q9UK11 482 aaPredicted RBP13.21□□□□□ -0.29
RNF4-208ENST00000507247 NPPAP01160 153 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 MNAT1P51948 309 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 MVDP53602 400 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 PRKAG1P54619 331 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 CASP9P55211 416 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 MTPNP58546 118 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 SLC26A5P58743 744 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 MXRA7P84157 204 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 TP53BP2Q13625 1128 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 ATP1A1-AS1Q5TC04 95 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 NANOGP8Q6NSW7 305 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 CCDC121Q6ZUS5 278 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 C6orf120Q7Z4R8 191 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 TRIML2Q8N7C3 387 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 ZNF615Q8N8J6 731 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 APCDD1LQ8NCL9 501 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 MORN4Q8NDC4 146 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 B3GNT7Q8NFL0 401 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 OR56A1Q8NGH5 318 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 OR1N1Q8NGS0 311 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 PNPT1Q8TCS8 783 aaKnown RBP13.2□□□□□ -0.3
RNF4-208ENST00000507247 NCLNQ969V3 563 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 NEURL3Q96EH8 262 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 IMMP1LQ96LU5 166 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 ANKRD27Q96NW4 1050 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 OR10A5Q9H207 317 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 SERHL2Q9H4I8 314 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 NANOGQ9H9S0 305 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 C3orf14Q9HBI5 128 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 P4HTMQ9NXG6 502 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 TAS2R1Q9NYW7 299 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 BCAP29Q9UHQ4 241 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 PPIEQ9UNP9 301 aaKnown RBP13.2□□□□□ -0.3
RNF4-208ENST00000507247 DTX4Q9Y2E6 619 aa13.2□□□□□ -0.3
RNF4-208ENST00000507247 CLIC1O00299 241 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 KLK10O43240 276 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 DYRK3O43781 588 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 CELA2AP08217 269 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 KRT16P08779 473 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 SLC6A2P23975 617 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 CHI3L1P36222 383 aaPredicted RBP13.19□□□□□ -0.3
RNF4-208ENST00000507247 EMDP50402 254 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 SLC37A1P57057 533 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 PSME3P61289 254 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 NCALDP61601 193 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 RPS26P62854 115 aaKnown RBP13.19□□□□□ -0.3
RNF4-208ENST00000507247 PRR5P85299 388 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 RABL3Q5HYI8 236 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 COX20Q5RI15 118 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 NDUFAF7Q7L592 441 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 WDR53Q7Z5U6 358 aaPredicted RBP13.19□□□□□ -0.3
RNF4-208ENST00000507247 PGAM4Q8N0Y7 254 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 C10orf111Q8N326 155 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 OR7G1Q8NGA0 311 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 C16orf52Q8NHV5 167 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 NACC2Q96BF6 587 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 MOAP1Q96BY2 351 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 C16orf58Q96GQ5 468 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 SLC35G5Q96KT7 338 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 ART5Q96L15 291 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 MS4A4EQ96PG1 132 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 YIPF4Q9BSR8 244 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 SEMA4CQ9C0C4 833 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 EQTNQ9NQ60 294 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 FBXL4Q9UKA2 621 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 RALYQ9UKM9 306 aaKnown RBP13.19□□□□□ -0.3
RNF4-208ENST00000507247 GMEB1Q9Y692 573 aa13.19□□□□□ -0.3
RNF4-208ENST00000507247 NSG1A0A0A6YYJ2 146 aa13.18□□□□□ -0.3
RNF4-208ENST00000507247 CDC14CA4D256 554 aa13.18□□□□□ -0.3
RNF4-208ENST00000507247 NKX2-8O15522 239 aa13.18□□□□□ -0.3
RNF4-208ENST00000507247 EFSO43281 561 aa13.18□□□□□ -0.3
RNF4-208ENST00000507247 PRKNO60260 465 aaPredicted RBP13.18□□□□□ -0.3
RNF4-208ENST00000507247 PRAMEF2O60811 474 aa13.18□□□□□ -0.3
RNF4-208ENST00000507247 COQ9O75208 318 aa13.18□□□□□ -0.3
RNF4-208ENST00000507247 HPP00738 406 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms