RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 LINC01356Q8N9X3 169 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 OR8K1Q8NGG5 319 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 LPGAT1Q92604 370 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 NEIL2Q969S2 332 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 OR4K3Q96R72 315 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 ERVK-6Q9BXR3 956 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 COPS7BQ9H9Q2 264 aaPredicted RBP6.43□□□□□ -1.38
VCAN-207ENST00000507162 RNF122Q9H9V4 155 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 SNX15Q9NRS6 342 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 KLRF1Q9NZS2 232 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 DKKL1Q9UK85 242 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 POU2F3Q9UKI9 436 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 DAPP1Q9UN19 280 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 ERVK-19Q9WJR5 959 aa6.43□□□□□ -1.38
VCAN-207ENST00000507162 PABPN1LA6NDY0 278 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 E7EQL1 145 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 E7EVH7 732 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 ABCD4O14678 606 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 AQP8O94778 261 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 VAPBO95292 243 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 NTN1O95631 604 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 HIST1H2AGP0C0S8 130 aaPredicted RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 PEPDP12955 493 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 PSMB1P20618 241 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 HIST1H2ADP20671 130 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 MGAT1P26572 445 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 HNRNPH1P31943 449 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 STT3AP46977 705 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 TMED10P49755 219 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 SUCLG1P53597 346 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 NRG3P56975 720 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 SLC37A1P57057 533 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 UBE2HP62256 183 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 RPS13P62277 151 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 CRADDP78560 199 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 REEP5Q00765 189 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 MYL5Q02045 173 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 EBPQ15125 230 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 BCL2A1Q16548 175 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 SGCBQ16585 318 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 OR5M10Q6IEU7 315 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 C11orf71Q6IPW1 123 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 SLC30A6Q6NXT4 461 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 SHQ1Q6PI26 577 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 CES3Q6UWW8 571 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 ZNF793Q6ZN11 406 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 STK32CQ86UX6 486 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 MUC15Q8N387 334 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 GPATCH11Q8N954 259 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 WDSUB1Q8N9V3 476 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 OR6K3Q8NGY3 331 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 OR2W6PQ8NHA6 318 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 GIMAP7Q8NHV1 300 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 PIWIL2Q8TC59 973 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 FBF1Q8TES7 1133 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 SLC5A11Q8WWX8 675 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 NXNL1Q96CM4 212 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 MS4A6EQ96DS6 147 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 HIST1H2AHQ96KK5 128 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 NODALQ96S42 347 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 SERINC2Q96SA4 455 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 HIST1H2AJQ99878 128 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 DHRS9Q9BPW9 319 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 MAPKAP1Q9BPZ7 522 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 H2AFJQ9BTM1 129 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 OSBPL11Q9BXB4 747 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 HDHD5Q9BXW7 423 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 OR10A4Q9H209 315 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 C12orf49Q9H741 205 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 UNKLQ9H9P5 680 aaKnown RBP6.42□□□□□ -1.38
VCAN-207ENST00000507162 FBXO34Q9NWN3 711 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 WHRNQ9P202 907 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 ADAMTS6Q9UKP5 1117 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 DYRK1BQ9Y463 629 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 PMF1-BGLAPU3KQ54 211 aa6.42□□□□□ -1.38
VCAN-207ENST00000507162 NPIPA5A0A0B4J1W7 369 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 LRIT2A6NDA9 550 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 CCT8L1PA6NM43 557 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 BTNL10A8MVZ5 291 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 NPIPA7E9PJI5 369 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 NDUFS8O00217 210 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 PSTPIP1O43586 416 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 FGF17O60258 216 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 H2AFYO75367 372 aaKnown RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 ABCB1P08183 1280 aaPredicted RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 F7P08709 466 aaPredicted RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 TMEM253P0C7T8 217 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 NPIPA8P0DM63 369 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 COL6A2P12110 1019 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 BMP4P12644 408 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 ENO3P13929 434 aaPredicted RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 PCMT1P22061 227 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 CPN2P22792 545 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 APEX1P27695 318 aaKnown RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 NMBRP28336 390 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 SRD5A2P31213 254 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 IL2RGP31785 369 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 DEKP35659 375 aaKnown RBP6.41□□□□□ -1.38
VCAN-207ENST00000507162 CLDN15P56746 228 aa6.41□□□□□ -1.38
VCAN-207ENST00000507162 SESN2P58004 480 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 509.9 ms