RNA–Protein interactions for RNA: ENST00000506560.5

LIN54-206, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 2,757 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-206ENST00000506560 SERINC2Q96SA4 455 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 FANCEQ9HB96 536 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 LYARQ9NX58 379 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 GPR55Q9Y2T6 319 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 GPC6Q9Y625 555 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 CACNA1EQ15878 2313 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 OR5K4A6NMS3 321 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 GUCY1B2O75343 617 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CDC123O75794 336 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 GADD45GO95257 159 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 GASTP01350 101 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 BUD31P41223 144 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 PPM1FP49593 454 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 BLKP51451 505 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 EPS8Q12929 822 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 RFX4Q33E94 735 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CCNJQ5T5M9 372 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 ARHGAP22Q7Z5H3 698 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 CLVS1Q8IUQ0 354 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 METTL27Q8N6F8 245 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 C1orf216Q8TAB5 229 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 APH1BQ8WW43 257 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 SLC35A4Q96G79 324 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 NMNAT1Q9HAN9 279 aaPredicted RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 AMBNQ9NP70 447 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 SEMA3GQ9NS98 782 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 DDX18Q9NVP1 670 aaKnown RBP11.45□□□□□ -0.58
LIN54-206ENST00000506560 CHST2Q9Y4C5 530 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 PCDHGA6Q9Y5G7 932 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 ENTPD2Q9Y5L3 495 aa11.45□□□□□ -0.58
LIN54-206ENST00000506560 EMC8O43402 210 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 UBXN7O94888 489 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 IFNA14P01570 189 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 CT62P0C5K7 136 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 HOXB6P17509 224 aaKnown RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 KHKP50053 298 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 MAT1AQ00266 395 aaKnown RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 ERV3-1Q14264 604 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 SYT16Q17RD7 645 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 FGD3Q5JSP0 725 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 KLHL17Q6TDP4 642 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 TMEM64Q6YI46 380 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 VRK2Q86Y07 508 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 LRRC25Q8N386 305 aaPredicted RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 OR6T1Q8NGN1 323 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 B4GALNT2Q8NHY0 566 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ADAMTS16Q8TE57 1224 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 HDAC2Q92769 488 aaKnown RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 PROX1Q92786 737 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ALPK1Q96QP1 1244 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 CCDC3Q9BQI4 270 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 DOLKQ9UPQ8 538 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 TMEM131Q92545 1883 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 TP53BP1Q12888 1972 aaPredicted RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 CYR61O00622 381 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 GALR3O60755 368 aaPredicted RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 DPM1O60762 260 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 WBP4O75554 376 aaKnown RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 ANGPTL1O95841 491 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 PTNP21246 168 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 PDX1P52945 283 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ARFIP1P53367 373 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ELOAQ14241 798 aaKnown RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 ZNF773Q6PK81 442 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ABHD13Q7L211 337 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ENTHD1Q8IYW4 607 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 SPARTQ8N0X7 666 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 AQP11Q8NBQ7 271 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 OR4K14Q8NGD5 310 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 FBLIM1Q8WUP2 373 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ZFPM2Q8WW38 1151 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 SLC9A6Q92581 669 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 CDS1Q92903 461 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 ZNF347Q96SE7 839 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 SLC38A1Q9H2H9 487 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 GIMAP4Q9NUV9 329 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 FBXO34Q9NWN3 711 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 TUBA8Q9NY65 449 aaPredicted RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 ERVK-18Q9QC07 812 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 MKLN1Q9UL63 735 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 NTNG1Q9Y2I2 539 aa11.44□□□□□ -0.58
LIN54-206ENST00000506560 FAM32AQ9Y421 112 aaKnown RBP11.44□□□□□ -0.58
LIN54-206ENST00000506560 A0A0A6YYC8 382 aaPredicted RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 E9PQ18 207 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 I3L1I5 382 aaPredicted RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 RHCEP18577 417 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 RYKP34925 604 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 RACK1P63244 317 aaKnown RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 KCNC4Q03721 635 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 ZP2Q05996 745 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 EXOSC7Q15024 291 aaKnown RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 GPR107Q5VW38 600 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 GPR141Q7Z602 305 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 CA13Q8N1Q1 262 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 C19orf47Q8N9M1 422 aaKnown RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 RNF217Q8TC41 542 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 PHF10Q8WUB8 498 aaKnown RBP11.43□□□□□ -0.58
LIN54-206ENST00000506560 ZNF354BQ96LW1 612 aa11.43□□□□□ -0.58
LIN54-206ENST00000506560 PHOX2BQ99453 314 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms