RNA–Protein interactions for RNA: ENST00000506516.5

GYPB-206, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 473 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-206ENST00000506516 OR2T11Q8NH01 316 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 DNAJB8Q8NHS0 232 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 NUBPLQ8TB37 319 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SLC22A8Q8TCC7 542 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 ASB15Q8WXK1 588 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 TP53INP1Q96A56 240 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 EXOSC8Q96B26 276 aaKnown RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 TUBGCP3Q96CW5 907 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 C19orf60Q96EN9 201 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 CNRIP1Q96F85 164 aaPredicted RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 ZNF681Q96N22 645 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 PRPF18Q99633 342 aaKnown RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 NPAS2Q99743 824 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 SH3GL2Q99962 352 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 BRINP2Q9C0B6 783 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 C20orf27Q9GZN8 174 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 OR10A5Q9H207 317 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 LIN28AQ9H9Z2 209 aaKnown RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 NPHS2Q9NP85 383 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 MYNNQ9NPC7 610 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 TAS2R7Q9NYW3 318 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 PRODH2Q9UF12 536 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 BCAP29Q9UHQ4 241 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 ZNF223Q9UK11 482 aaPredicted RBP6.74□□□□□ -1.33
GYPB-206ENST00000506516 ERVK-11Q9UQG0 969 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 CSAG2Q9Y5P2 127 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 PTGDR2Q9Y5Y4 395 aa6.74□□□□□ -1.33
GYPB-206ENST00000506516 NUP210LQ5VU65 1888 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 A8MVJ9 347 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 KLRC4-KLRK1H3BQV0 150 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 HRKO00198 91 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 KLF11O14901 512 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 PRKNO60260 465 aaPredicted RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 NEURL1O76050 574 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 SLITRK5O94991 958 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 CRYABP02511 175 aaKnown RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 BCKDHAP12694 445 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 EDN3P14138 238 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 NTSP30990 170 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 ARRB2P32121 409 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 HK2P52789 917 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 NRG3P56975 720 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 SLC37A1P57057 533 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 EMX2Q04743 252 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 FUT7Q11130 342 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 PDCD2Q16342 344 aaPredicted RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 MAPKAPK3Q16644 382 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 PRICKLE4Q2TBC4 344 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 ZNF750Q32MQ0 723 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 XKR7Q5GH72 579 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 PIGGQ5H8A4 983 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 C6orf136Q5SQH8 315 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 FAM180BQ6P0A1 224 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 FAM180AQ6UWF9 173 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 IL20RBQ6UXL0 311 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 DND1Q8IYX4 353 aaKnown RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 FAM9CQ8IZT9 166 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 TAGAPQ8N103 731 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 CYP4Z2PQ8N1L4 340 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 LIX1Q8N485 282 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 NATD1Q8N6N6 113 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 BCORP1Q8N888 145 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 ZNF615Q8N8J6 731 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 ADCY4Q8NFM4 1077 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.73□□□□□ -1.33
GYPB-206ENST00000506516 DOK4Q8TEW6 326 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 DYDC1Q8WWB3 177 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 ZNF75CPQ92670 426 aaPredicted RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 PPCDCQ96CD2 204 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 SNRNP40Q96DI7 357 aaKnown RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 ERP27Q96DN0 273 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 MTERF3Q96E29 417 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 EGLN2Q96KS0 407 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 FCRL1Q96LA6 429 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 SGCZQ96LD1 299 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 C3orf30Q96M34 536 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 TSSK3Q96PN8 268 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 SIGLEC12Q96PQ1 595 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 RASL10BQ96S79 203 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 SORT1Q99523 831 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 REEP4Q9H6H4 257 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 TRIM45Q9H8W5 580 aaPredicted RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 KLHL1Q9NR64 748 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 PNPOQ9NVS9 261 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 HPF1Q9NWY4 346 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 DNAJB12Q9NXW2 375 aaKnown RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 SH3BP4Q9P0V3 963 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 BAIAP2L1Q9UHR4 511 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 HAO1Q9UJM8 370 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 MAPRE3Q9UPY8 281 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 KLF13Q9Y2Y9 288 aaPredicted RBP6.73□□□□□ -1.33
GYPB-206ENST00000506516 FAM208BQ5VWN6 2430 aa6.73□□□□□ -1.33
GYPB-206ENST00000506516 A0A1W2PS29 197 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 FAM181BA6NEQ2 426 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 TMEM200CA6NKL6 621 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 TRPC5OSA6NMA1 111 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 MYO1GB0I1T2 1018 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 HDAC3O15379 428 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 AKAP10O43572 662 aa6.72□□□□□ -1.33
GYPB-206ENST00000506516 TBX19O60806 448 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms